RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ING4Q9UNL4 249 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 A0A087WXM4 84 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 ATP9AO75110 1047 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 S100A6P06703 90 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 TARSP26639 723 aaKnown RBP12.04□□□□□ -0.48
PTCH1-209ENST00000437951 NUDT2P50583 147 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 KIF2BQ8N4N8 673 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 DPP10Q8N608 796 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 VPS33AQ96AX1 596 aa12.04□□□□□ -0.48
PTCH1-209ENST00000437951 PNMA6FA0A0J9YX94 578 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 BTN3A3O00478 584 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 POLBP06746 335 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 ATN1P54259 1190 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 TRAF3Q13114 568 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 SLC18A3Q16572 532 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 KNOP1Q1ED39 458 aaKnown RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 CACHD1Q5VU97 1274 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 RNFT2Q96EX2 444 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 NDFIP2Q9NV92 336 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 PAK5Q9P286 719 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 MTSS1O43312 755 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 RGS4P49798 205 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 HSD17B4P51659 736 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 NPEPPSP55786 919 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 PTK6Q13882 451 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 UGT3A1Q6NUS8 523 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 TMCC3Q9ULS5 477 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 FAM170AA1A519 330 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 HOXC9P31274 260 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 NNMTP40261 264 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 TOP3AQ13472 1001 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 SH3KBP1Q96B97 665 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 COMMD3-BMI1R4GMX3 469 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 C3orf70A6NLC5 250 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 ROR2Q01974 943 aaKnown RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 CENPLQ8N0S6 344 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 MYCBPAPQ8TBZ2 947 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 TMEM79Q9BSE2 394 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 ARHGEF38Q9NXL2 777 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 FNDC3AQ9Y2H6 1198 aaKnown RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 MEI4A8MW99 385 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 ZNF23P17027 643 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 PAIP1Q9H074 479 aaKnown RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 EURLQ9NYK6 297 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 BTBD3Q9Y2F9 522 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 PHGDHO43175 533 aaKnown RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 JAK1P23458 1154 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 RIPPLY1Q0D2K3 151 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 MFSD14BQ5SR56 506 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 RNF135Q8IUD6 432 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 LRRC47Q8N1G4 583 aaKnown RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 GUF1Q8N442 669 aaKnown RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 SHCBP1Q8NEM2 672 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 RAD54LQ92698 747 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 TIPINQ9BVW5 301 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 MYLK2Q9H1R3 596 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 TASP1Q9H6P5 420 aa12.03□□□□□ -0.48
PTCH1-209ENST00000437951 R3HDM2Q9Y2K5 976 aaKnown RBP12.03□□□□□ -0.48
PTCH1-209ENST00000437951 C1orf232A0A0U1RR37 186 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 VAMP7P51809 220 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 SLC34A1Q06495 639 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 IDI1Q13907 227 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 OR6P1Q8NGX9 317 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 POP5Q969H6 163 aaKnown RBP12.02□□□□□ -0.48
PTCH1-209ENST00000437951 PGBD4Q96DM1 585 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 EYA1Q99502 592 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 MTA3Q9BTC8 594 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 PLEKHA5Q9HAU0 1116 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 TOPORSQ9NS56 1045 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-209ENST00000437951 CRNNQ9UBG3 495 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-209ENST00000437951 TMA7Q9Y2S6 64 aaKnown RBP12.02□□□□□ -0.48
PTCH1-209ENST00000437951 C15orf41Q9Y2V0 281 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 UHRF1BP1LA0JNW5 1464 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 A0A1W2PRG6 482 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 IDH3BO43837 385 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 BAIAP3O94812 1187 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 SASH1O94885 1247 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 TKTP29401 623 aaKnown RBP12.02□□□□□ -0.48
PTCH1-209ENST00000437951 LGALS3BPQ08380 585 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 LONRF1Q17RB8 773 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 EFHC1Q5JVL4 640 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 PTPRN2Q92932 1015 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 DCUN1D1Q96GG9 259 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 SPATA16Q9BXB7 569 aa12.02□□□□□ -0.48
PTCH1-209ENST00000437951 DHX36Q9H2U1 1008 aaKnown RBP12.02□□□□□ -0.48
PTCH1-209ENST00000437951 NOL6Q9H6R4 1146 aaKnown RBP12.02□□□□□ -0.48
PTCH1-209ENST00000437951 TLR7Q9NYK1 1049 aaKnown RBP12.02□□□□□ -0.48
PTCH1-209ENST00000437951 ABCC10Q5T3U5 1492 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 APBA3O96018 575 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 MZT2AQ6P582 158 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 IZUMO2Q6UXV1 221 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 MIGA2Q7L4E1 593 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 FASTKD5Q7L8L6 764 aaKnown RBP12.02□□□□□ -0.49
PTCH1-209ENST00000437951 CCNJLQ8IV13 435 aa12.02□□□□□ -0.49
PTCH1-209ENST00000437951 FMR1NBQ8N0W7 255 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-209ENST00000437951 EIF3LQ9Y262 564 aaKnown RBP12.02□□□□□ -0.49
PTCH1-209ENST00000437951 STX11O75558 287 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms