RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 GNA15P30679 374 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 ARL2P36404 184 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 CDH8P55286 799 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 MYL6P60660 151 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 TFAMQ00059 246 aaKnown RBP10.07□□□□□ -0.8
CUX1-206ENST00000437600 PLCB4Q15147 1175 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 SIX1Q15475 284 aaPredicted RBP10.07□□□□□ -0.8
CUX1-206ENST00000437600 TARBP2Q15633 366 aaKnown RBP10.07□□□□□ -0.8
CUX1-206ENST00000437600 ZACNQ401N2 412 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 CCDC62Q6P9F0 684 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 KDM7AQ6ZMT4 941 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 RAB17Q9H0T7 212 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 MROH8Q9H579 483 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 FAM114A2Q9NRY5 505 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 ADAM22Q9P0K1 906 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 GGT7Q9UJ14 662 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 GTF3C4Q9UKN8 822 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 PHF2O75151 1096 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 KRT19P08727 400 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 ZSCAN5DPP0CG00 497 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 ETS1P14921 441 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 GCLCP48506 637 aaPredicted RBP10.07□□□□□ -0.8
CUX1-206ENST00000437600 CCNA1P78396 465 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 SKOR1P84550 965 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 LAMTOR4Q0VGL1 99 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 PTGISQ16647 500 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 KYNUQ16719 465 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 CYP4A22Q5TCH4 519 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 GLIS1Q8NBF1 620 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 RNF217Q8TC41 542 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 PPM1EQ8WY54 764 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 RUBCNQ92622 972 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 MINDY3Q9H8M7 445 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 C17orf75Q9HAS0 396 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 FLRT1Q9NZU1 646 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 TTC7AQ9ULT0 858 aaPredicted RBP10.07□□□□□ -0.8
CUX1-206ENST00000437600 LRRC37A2A6NM11 1700 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 F8VP50 259 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 NAMPTP43490 491 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 RAP1GAPP47736 663 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 SATB1Q01826 763 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 KRT17Q04695 432 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 TMEM62Q0P6H9 643 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 TTLL4Q14679 1199 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 SYCP2LQ5T4T6 812 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 NLRP14Q86W24 1093 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 TMC2Q8TDI7 906 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 NAP1L3Q99457 506 aaPredicted RBP10.07□□□□□ -0.8
CUX1-206ENST00000437600 NIFKQ9BYG3 293 aaKnown RBP10.07□□□□□ -0.8
CUX1-206ENST00000437600 WNT8AQ9H1J5 351 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 PCDHB2Q9Y5E7 798 aa10.07□□□□□ -0.8
CUX1-206ENST00000437600 ARID2Q68CP9 1835 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 MIF4GDA9UHW6 222 aaKnown RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 HMGB1P1B2RPK0 211 aaPredicted RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 TLR3O15455 904 aaKnown RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 MAFO75444 373 aaPredicted RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 VTNP04004 478 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 ATF7P17544 494 aaPredicted RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 RFX1P22670 979 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 GTF2H1P32780 548 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 VEGFBP49765 207 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 APLP1P51693 650 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 NOP14P78316 857 aaKnown RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 NCOA4Q13772 614 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 KCNT1Q5JUK3 1230 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 FBXW10Q5XX13 1052 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 C11orf63Q6NUN7 778 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 EFCAB12Q6NXP0 572 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 CD302Q8IX05 232 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 MYCBPAPQ8TBZ2 947 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 ZNF473Q8WTR7 871 aaKnown RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 ZNF606Q8WXB4 792 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 SEC14L1Q92503 715 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 RPS6KC1Q96S38 1066 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 EPN3Q9H201 632 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 MORF4L1Q9UBU8 362 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 RANBP2P49792 3224 aaKnown RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 TP73O15350 636 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 ADCY6O43306 1168 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 ADCY3O60266 1144 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 INSRRP14616 1297 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 ACO1P21399 889 aaKnown RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 CTNNA2P26232 953 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 ADCY8P40145 1251 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 CUL2Q13617 745 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 SPRED3Q2MJR0 410 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 C17orf99Q6UX52 265 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 PLEKHH3Q7Z736 793 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 RBBP8NLQ8NC74 664 aaPredicted RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 RAPGEF5Q92565 580 aa10.06□□□□□ -0.8
CUX1-206ENST00000437600 MPHOSPH6Q99547 160 aaKnown RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 PABPC3Q9H361 631 aaKnown RBP10.06□□□□□ -0.8
CUX1-206ENST00000437600 ADGRA2Q96PE1 1338 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 BHMG1C9JSJ3 638 aaPredicted RBP10.05□□□□□ -0.8
CUX1-206ENST00000437600 PPFIA2O75334 1257 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 IQCF3P0C7M6 154 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 GARTP22102 1010 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 CHRNA3P32297 505 aa10.05□□□□□ -0.8
CUX1-206ENST00000437600 CORO7P57737 925 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms