RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 OLIG1Q8TAK6 271 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 URGCPQ8TCY9 931 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 ELMO3Q96BJ8 720 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 PPP1R13BQ96KQ4 1090 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 UROC1Q96N76 676 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 LBHD1Q9BQE6 289 aaPredicted RBP12.13□□□□□ -0.47
PCOTH-203ENST00000435039 SMYD3Q9H7B4 428 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 CISHQ9NSE2 258 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 NXF1Q9UBU9 619 aaKnown RBP12.13□□□□□ -0.47
PCOTH-203ENST00000435039 NOCTQ9UK39 431 aaKnown RBP12.13□□□□□ -0.47
PCOTH-203ENST00000435039 NENFQ9UMX5 172 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 POLIQ9UNA4 740 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 PCDHB4Q9Y5E5 795 aa12.13□□□□□ -0.47
PCOTH-203ENST00000435039 PPEF2O14830 753 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 CYP26A1O43174 497 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 CYP11B1P15538 503 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 PAX3P23760 479 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 RPL9P32969 192 aaKnown RBP12.12□□□□□ -0.47
PCOTH-203ENST00000435039 CLCN1P35523 988 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 USP8P40818 1118 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 TUSC3Q13454 348 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 CLLU1OSQ5K130 101 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 C10orf76Q5T2E6 689 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 TMEM270Q6UE05 265 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 ZNF662Q6ZS27 426 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 NPAS4Q8IUM7 802 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 TMEM130Q8N3G9 435 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 GOLGA2P5Q9HBQ8 144 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 RNF19AQ9NV58 838 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
PCOTH-203ENST00000435039 REXO2Q9Y3B8 237 aaKnown RBP12.12□□□□□ -0.47
PCOTH-203ENST00000435039 FNDC1Q4ZHG4 1894 aaPredicted RBP12.12□□□□□ -0.47
PCOTH-203ENST00000435039 EYSQ5T1H1 3165 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 COL4A6Q14031 1691 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 PODXLO00592 558 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 ENPP3O14638 875 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 ZNF263O14978 683 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 EFCAB14O75071 495 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 CILPO75339 1184 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 CD58P19256 250 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 GNA15P30679 374 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 VAV2P52735 878 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 CDR2Q01850 454 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
PCOTH-203ENST00000435039 TCTN1Q2MV58 587 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 NOMO2Q5JPE7 1267 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 FAM109BQ6ICB4 259 aaPredicted RBP12.11□□□□□ -0.47
PCOTH-203ENST00000435039 MFSD5Q6N075 450 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
PCOTH-203ENST00000435039 SLC47A2Q86VL8 602 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
PCOTH-203ENST00000435039 TOP6BLQ8N6T0 577 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 LNX1Q8TBB1 728 aaPredicted RBP12.11□□□□□ -0.47
PCOTH-203ENST00000435039 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
PCOTH-203ENST00000435039 AGPAT1Q99943 283 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 MRPL9Q9BYD2 267 aaKnown RBP12.11□□□□□ -0.47
PCOTH-203ENST00000435039 TSGA10Q9BZW7 698 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 SDCBP2Q9H190 292 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
PCOTH-203ENST00000435039 KANSL3Q9P2N6 904 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 PRKAG2Q9UGJ0 569 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 INPP5FQ9Y2H2 1132 aa12.11□□□□□ -0.47
PCOTH-203ENST00000435039 A0A087X0T9 212 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.1□□□□□ -0.47
PCOTH-203ENST00000435039 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 DDX3XO00571 662 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCOTH-203ENST00000435039 TACC1O75410 805 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 POMCP01189 267 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 PAEPP09466 180 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 FAM228BP0C875 321 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 RAG1P15918 1043 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 IBSPP21815 317 aaPredicted RBP12.1□□□□□ -0.47
PCOTH-203ENST00000435039 RAP1GAPP47736 663 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 AARSP49588 968 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCOTH-203ENST00000435039 AFF1P51825 1210 aaKnown RBP12.1□□□□□ -0.47
PCOTH-203ENST00000435039 FMO1Q01740 532 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 DSC1Q08554 894 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 UPP1Q16831 310 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 PPP1R2P3Q6NXS1 205 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 TRIM72Q6ZMU5 477 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 LIMS2Q7Z4I7 341 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 KIAA1328Q86T90 577 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 GLYCTKQ8IVS8 523 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 REXO1L1PQ8IX06 675 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 RPUSD2Q8IZ73 545 aaKnown RBP12.1□□□□□ -0.47
PCOTH-203ENST00000435039 ABI1Q8IZP0 508 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 CRIPAKQ8N1N5 446 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 TMEM199Q8N511 208 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 SLC30A5Q8TAD4 765 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 SPATA18Q8TC71 538 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 SLC20A1Q8WUM9 679 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
PCOTH-203ENST00000435039 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
PCOTH-203ENST00000435039 GUCD1Q96NT3 240 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCOTH-203ENST00000435039 MIOSQ9NXC5 875 aa12.1□□□□□ -0.47
PCOTH-203ENST00000435039 ADAMTS1Q9UHI8 967 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms