RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CNTNAP2Q9UHC6 1331 aa12.51□□□□□ -0.41
CD44-209ENST00000433892 MYH9P35579 1960 aaKnown RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 TTLL13PA6NNM8 815 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 MGRN1O60291 552 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 SUN1O94901 812 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 CST3P01034 146 aaPredicted RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 ETS1P14921 441 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 IBSPP21815 317 aaPredicted RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 TBXAS1P24557 533 aaPredicted RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 STX2P32856 288 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 ZNF280AP59817 542 aaPredicted RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 ZNF394Q53GI3 561 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 ZNF772Q68DY9 489 aaPredicted RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 MFSD7Q6UXD7 560 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 TBC1D1Q86TI0 1168 aaPredicted RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 TCP11Q8WWU5 503 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 TGS1Q96RS0 853 aaKnown RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 CCDC77Q9BR77 488 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 TEX13BQ9BXU2 312 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 ACAD9Q9H845 621 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 IP6K2Q9UHH9 426 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 LGALS13Q9UHV8 139 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 CNTN6Q9UQ52 1028 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 ZNF148Q9UQR1 794 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 MAFBQ9Y5Q3 323 aaPredicted RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 IVNS1ABPQ9Y6Y0 642 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 F8VP50 259 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 LIASO43766 372 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 LDHAP00338 332 aaKnown RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 PIGRP01833 764 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 MMP8P22894 467 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 ARL2P36404 184 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 OAZ1P54368 228 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 ZNF252P-AS1Q0IIN9 211 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 STAT4Q14765 748 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 TMED2Q15363 201 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 CCDC91Q7Z6B0 441 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 MICALL2Q8IY33 904 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 ZCCHC9Q8N567 271 aaKnown RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 HAUS1Q96CS2 278 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 MCEEQ96PE7 176 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 SLITRK1Q96PX8 696 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 SAYSD1Q9NPB0 183 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 KCNG1Q9UIX4 513 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
CD44-209ENST00000433892 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
CD44-209ENST00000433892 PARP14Q460N5 1801 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 TMEM191CA6NGB0 347 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 RASA4BC9J798 803 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 HGSO14964 777 aaPredicted RBP12.49□□□□□ -0.41
CD44-209ENST00000433892 RASA4O43374 803 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 KRT1P04264 644 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 TMEM191BP0C7N4 346 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 CETN2P41208 172 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 TNFSF9P41273 254 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 TXNRD3NBQ6F5E7 133 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 SPATA21Q7Z572 469 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 PNMA8AQ86V59 439 aaPredicted RBP12.49□□□□□ -0.41
CD44-209ENST00000433892 RELL1Q8IUW5 271 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 RCOR2Q8IZ40 523 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 CAMKK2Q96RR4 588 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 AS3MTQ9HBK9 375 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 NKIRAS1Q9NYS0 192 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 TJP3O95049 919 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 BRD2P25440 801 aaKnown RBP12.49□□□□□ -0.41
CD44-209ENST00000433892 ARSEP51690 589 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 OGDHQ02218 1023 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 CNTN2Q02246 1040 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 FASTKD3Q14CZ7 662 aaKnown RBP12.49□□□□□ -0.41
CD44-209ENST00000433892 DCUN1D2Q6PH85 259 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 CAPN12Q6ZSI9 719 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 ARHGEF18Q6ZSZ5 1173 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 ZBTB33Q86T24 672 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 RBM41Q96IZ5 413 aaKnown RBP12.49□□□□□ -0.41
CD44-209ENST00000433892 PAIP2Q9BPZ3 127 aaKnown RBP12.49□□□□□ -0.41
CD44-209ENST00000433892 IMPG2Q9BZV3 1241 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 BAIAP2L1Q9UHR4 511 aa12.49□□□□□ -0.41
CD44-209ENST00000433892 TNS1Q9HBL0 1735 aaKnown RBP12.49□□□□□ -0.41
CD44-209ENST00000433892 RLFQ13129 1914 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 EXOC1LA0A1B0GW35 172 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 PEX10O60683 326 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 STAM2O75886 525 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 ATP6V1G2O95670 118 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 PECAM1P16284 738 aaPredicted RBP12.48□□□□□ -0.41
CD44-209ENST00000433892 GMPSP49915 693 aaPredicted RBP12.48□□□□□ -0.41
CD44-209ENST00000433892 ZNF132P52740 706 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 TGFB2P61812 414 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 LMNB2Q03252 620 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 GPS1Q13098 491 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 CAPSQ13938 189 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 E2F5Q15329 346 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 STXBP2Q15833 593 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 CGB2Q6NT52 195 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 DNAJC24Q6P3W2 148 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 MAML1Q92585 1016 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 TCHPQ9BT92 498 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 MTMR12Q9C0I1 747 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 ECT2Q9H8V3 914 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms