RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SKAP2O75563 359 aaPredicted RBP7.13□□□□□ -1.27
USP54-206ENST00000433394 AGFG2O95081 481 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 KRT1P04264 644 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 CYP2C9P11712 490 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 CCT5P48643 541 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 CARSP49589 748 aaKnown RBP7.13□□□□□ -1.27
USP54-206ENST00000433394 BIRC3Q13489 604 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 FAM214AQ32MH5 1076 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 FRMD5Q7Z6J6 570 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 USP37Q86T82 979 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 XYLT1Q86Y38 959 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 SLC15A4Q8N697 577 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 PAF1Q8N7H5 531 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 DNAJC5GQ8N7S2 189 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 SLC17A8Q8NDX2 589 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 OR14A2Q96R54 314 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 STK31Q9BXU1 1019 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 IMPG2Q9BZV3 1241 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 STK32BQ9NY57 414 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 COL20A1Q9P218 1284 aa7.13□□□□□ -1.27
USP54-206ENST00000433394 A0A1W2PPC4 97 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 CCDC189A1A4V9 331 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 M0QYG6 137 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 HARSP12081 509 aaKnown RBP7.12□□□□□ -1.27
USP54-206ENST00000433394 MYL4P12829 197 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 FGFR2P21802 821 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 EEF1GP26641 437 aaKnown RBP7.12□□□□□ -1.27
USP54-206ENST00000433394 CHKAP35790 457 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 CTBP1Q13363 440 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 ELAVL1Q15717 326 aaKnown RBP7.12□□□□□ -1.27
USP54-206ENST00000433394 CCDC38Q502W7 563 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 METTL24Q5JXM2 366 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 KLHDC7AQ5VTJ3 777 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 FAM160B1Q5W0V3 765 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 DRICH1Q6PGQ1 229 aaPredicted RBP7.12□□□□□ -1.27
USP54-206ENST00000433394 TAX1BP1Q86VP1 789 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 GSPT2Q8IYD1 628 aaKnown RBP7.12□□□□□ -1.27
USP54-206ENST00000433394 ANKRD35Q8N283 1001 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 POU5F2Q8N7G0 328 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 TP53I13Q8NBR0 393 aaPredicted RBP7.12□□□□□ -1.27
USP54-206ENST00000433394 SPSB4Q96A44 273 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 PHACTR3Q96KR7 559 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 PAGR1Q9BTK6 254 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 PLA2G12BQ9BX93 195 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 KRTAP9-9Q9BYP9 154 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 KRTAP9-4Q9BYQ2 154 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 TINAGL1Q9GZM7 467 aaPredicted RBP7.12□□□□□ -1.27
USP54-206ENST00000433394 MYO1AQ9UBC5 1043 aa7.12□□□□□ -1.27
USP54-206ENST00000433394 A0A087WV62 115 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 F8W8V4 182 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 MATN2O00339 956 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 STC2O76061 302 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 MT-ND5P03915 603 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 ITGB1P05556 798 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 TYRP1P17643 537 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 GRK6P43250 576 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 HSPA7P48741 367 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 EPHB4P54760 987 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 ZNF844Q08AG5 666 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 PUM3Q15397 648 aaKnown RBP7.11□□□□□ -1.27
USP54-206ENST00000433394 ANKS6Q68DC2 871 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 OGFOD2Q6N063 350 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 GPR135Q8IZ08 494 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 D2HGDHQ8N465 521 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 ZSCAN18Q8TBC5 510 aaPredicted RBP7.11□□□□□ -1.27
USP54-206ENST00000433394 NUP133Q8WUM0 1156 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 MUL1Q969V5 352 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 SMOQ99835 787 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 MAGEB5Q9BZ81 275 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 MYLK2Q9H1R3 596 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 PLA2G3Q9NZ20 509 aa7.11□□□□□ -1.27
USP54-206ENST00000433394 HECAQ9UBI9 543 aaPredicted RBP7.11□□□□□ -1.27
USP54-206ENST00000433394 NPEPPSL1A6NEC2 478 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 BTBD11A6QL63 1104 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 HMGB1P1B2RPK0 211 aaPredicted RBP7.1□□□□□ -1.27
USP54-206ENST00000433394 PIM1P11309 404 aaPredicted RBP7.1□□□□□ -1.27
USP54-206ENST00000433394 SLC11A2P49281 568 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 UCP3P55916 312 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 INSCQ1MX18 579 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 TMEM95Q3KNT9 176 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 CCDC174Q6PII3 467 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 LAYNQ6UX15 382 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 CATSPERGQ6ZRH7 1159 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 UNC13DQ70J99 1090 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 MED25Q71SY5 747 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 RNF152Q8N8N0 203 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 RNF169Q8NCN4 708 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 OR10H5Q8NGA6 315 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 PPP1R9BQ96SB3 815 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 TTLL2Q9BWV7 592 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 MS4A7Q9GZW8 240 aaPredicted RBP7.1□□□□□ -1.27
USP54-206ENST00000433394 AGO3Q9H9G7 860 aaKnown RBP7.1□□□□□ -1.27
USP54-206ENST00000433394 SMURF2Q9HAU4 748 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 TM7SF3Q9NS93 570 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 FBXO34Q9NWN3 711 aa7.1□□□□□ -1.27
USP54-206ENST00000433394 A0A087WWL8 130 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 AREL1O15033 823 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 CYP27B1O15528 508 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 SH3BP5O60239 455 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 CKBP12277 381 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms