RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 RC3H2Q9HBD1 1191 aaKnown RBP28.32■■■□□ 2.12
TMEM248-205ENST00000433271 PCDHB4Q9Y5E5 795 aa28.32■■■□□ 2.12
TMEM248-205ENST00000433271 TMEM189-UBE2V1I3L0A0 370 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 ALDH2P05091 517 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 SERPING1P05155 500 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 CD58P19256 250 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 RAP1GAPP47736 663 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 OR1G1P47890 313 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 CDH8P55286 799 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 CCZ1BP86790 482 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 CCZ1P86791 482 aaPredicted RBP28.31■■■□□ 2.12
TMEM248-205ENST00000433271 SOWAHAQ2M3V2 549 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 HGSNATQ68CP4 663 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 CD300LGQ6UXG3 332 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 CYP26C1Q6V0L0 522 aa28.31■■■□□ 2.12
TMEM248-205ENST00000433271 BZW2Q9Y6E2 419 aaKnown RBP28.31■■■□□ 2.12
TMEM248-205ENST00000433271 PRKCIP41743 596 aa28.3■■■□□ 2.12
TMEM248-205ENST00000433271 TMEM270Q6UE05 265 aa28.3■■■□□ 2.12
TMEM248-205ENST00000433271 DPH6Q7L8W6 267 aa28.3■■■□□ 2.12
TMEM248-205ENST00000433271 CMTR2Q8IYT2 770 aaKnown RBP28.3■■■□□ 2.12
TMEM248-205ENST00000433271 TOP6BLQ8N6T0 577 aa28.3■■■□□ 2.12
TMEM248-205ENST00000433271 CHP1Q99653 195 aa28.3■■■□□ 2.12
TMEM248-205ENST00000433271 MTIF3Q9H2K0 278 aaKnown RBP28.3■■■□□ 2.12
TMEM248-205ENST00000433271 SLC4A7Q9Y6M7 1214 aa28.3■■■□□ 2.12
TMEM248-205ENST00000433271 CYP26A1O43174 497 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 HUS1O60921 280 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 KIF4AO95239 1232 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 FAM163BP0C2L3 166 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 SKILP12757 684 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 CLCN1P35523 988 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 KLHL30Q0D2K2 578 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 INCA1Q0VD86 236 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 GPIHBP1Q8IV16 184 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 APPL2Q8NEU8 664 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 PHOSPHO2Q8TCD6 241 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 SENP8Q96LD8 212 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 COL4A6Q14031 1691 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 CYB561D2O14569 222 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 TACC1O75410 805 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 GJB5O95377 273 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 TIGD5Q53EQ6 642 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 SLC9A7Q96T83 725 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 ARHGAP20Q9P2F6 1191 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 HCSTQ9UBK5 93 aa28.29■■■□□ 2.12
TMEM248-205ENST00000433271 BARX2Q9UMQ3 279 aaPredicted RBP28.29■■■□□ 2.12
TMEM248-205ENST00000433271 NRP1O14786 923 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 CILPO75339 1184 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 GALTP07902 379 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 ZNF132P52740 706 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 BPIFB4P59827 614 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 DSTYKQ6XUX3 929 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 RBBP8NLQ8NC74 664 aaPredicted RBP28.28■■■□□ 2.12
TMEM248-205ENST00000433271 YME1L1Q96TA2 773 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 COLEC11Q9BWP8 271 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 CWH43Q9H720 699 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 L1RE1Q9UN81 338 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 FAN1Q9Y2M0 1017 aa28.28■■■□□ 2.12
TMEM248-205ENST00000433271 PRG3Q9Y2Y8 225 aaPredicted RBP28.28■■■□□ 2.12
TMEM248-205ENST00000433271 ITGB1P05556 798 aa28.27■■■□□ 2.12
TMEM248-205ENST00000433271 MAGEA10P43363 369 aaPredicted RBP28.27■■■□□ 2.12
TMEM248-205ENST00000433271 SLC11A1P49279 550 aa28.27■■■□□ 2.12
TMEM248-205ENST00000433271 BTG3Q14201 252 aaPredicted RBP28.27■■■□□ 2.12
TMEM248-205ENST00000433271 RASIP1Q5U651 963 aa28.27■■■□□ 2.12
TMEM248-205ENST00000433271 MRPL45Q9BRJ2 306 aaKnown RBP28.27■■■□□ 2.12
TMEM248-205ENST00000433271 HAUS4Q9H6D7 363 aa28.27■■■□□ 2.12
TMEM248-205ENST00000433271 F8W810 466 aa28.26■■■□□ 2.11
TMEM248-205ENST00000433271 PLEKP08567 350 aaPredicted RBP28.26■■■□□ 2.11
TMEM248-205ENST00000433271 HTRA4P83105 476 aaPredicted RBP28.26■■■□□ 2.11
TMEM248-205ENST00000433271 PTK2Q05397 1052 aa28.26■■■□□ 2.11
TMEM248-205ENST00000433271 TDRD12Q587J7 1177 aaKnown RBP28.26■■■□□ 2.11
TMEM248-205ENST00000433271 PDCL2Q8N4E4 241 aa28.26■■■□□ 2.11
TMEM248-205ENST00000433271 HASPINQ8TF76 798 aa28.26■■■□□ 2.11
TMEM248-205ENST00000433271 KBTBD7Q8WVZ9 684 aa28.26■■■□□ 2.11
TMEM248-205ENST00000433271 SUSD3Q96L08 255 aa28.26■■■□□ 2.11
TMEM248-205ENST00000433271 NHEJ1Q9H9Q4 299 aaPredicted RBP28.26■■■□□ 2.11
TMEM248-205ENST00000433271 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.26■■■□□ 2.111e-7■■□□□ 13.1
TMEM248-205ENST00000433271 PTPRSQ13332 1948 aa28.26■■■□□ 2.11
TMEM248-205ENST00000433271 SSU72P8A0A1W2PR75 194 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 M0QZQ0 153 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 ARHGAP6O43182 974 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 TADA2AO75478 443 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 ALDH7A1P49419 539 aaKnown RBP28.25■■■□□ 2.11
TMEM248-205ENST00000433271 BCAR1P56945 870 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 MAPK8IP2Q13387 824 aaPredicted RBP28.25■■■□□ 2.11
TMEM248-205ENST00000433271 SLC47A2Q86VL8 602 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 WHAMMQ8TF30 809 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 INSL6Q9Y581 213 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 ARHGEF37A1IGU5 675 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 SOWAHDA6NJG2 315 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 TRAPPC3O43617 180 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 ODC1P11926 461 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 CYP11B1P15538 503 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 ATP2A2P16615 1042 aaKnown RBP28.25■■■□□ 2.11
TMEM248-205ENST00000433271 BRCC3P46736 316 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 UNC93AQ86WB7 457 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 HERC6Q8IVU3 1022 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 CCDC170Q8IYT3 715 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 ADGRF2Q8IZF7 708 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 TMEM86AQ8N2M4 240 aa28.25■■■□□ 2.11
TMEM248-205ENST00000433271 CCDC42Q96M95 316 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms