RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 PCOLCE2Q9UKZ9 415 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ARL2BPQ9Y2Y0 163 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 PRKAB1Q9Y478 270 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 SNX8Q9Y5X2 465 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 MAD1L1Q9Y6D9 718 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ILVBLA1L0T0 632 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 hCG_2039718K7EN88 272 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 TRAFD1O14545 582 aaPredicted RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ZBTB39O15060 712 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 SHBGP04278 402 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ATP1A1P05023 1023 aaKnown RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 CYP17A1P05093 508 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 DNAJB2P25686 324 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ENTPD1P49961 510 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 NUP107P57740 925 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 C21orf58P58505 322 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 STK32CQ86UX6 486 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 FERMT3Q86UX7 667 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 TERB1Q8NA31 727 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 PHOSPHO2Q8TCD6 241 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 DACT3Q96B18 629 aaPredicted RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 MAP6Q96JE9 813 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 MNTQ99583 582 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 NUDT12Q9BQG2 462 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 SDF4Q9BRK5 362 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 PHF20Q9BVI0 1012 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 DDX47Q9H0S4 455 aaKnown RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 KCNQ5Q9NR82 932 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 AK5Q9Y6K8 562 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 A0A1W2PP64 1363 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 LRRC7Q96NW7 1537 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 DCAF8L1A6NGE4 600 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 DNAJB5O75953 348 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 KRT5P13647 590 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 SELLP14151 372 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 POU2F1P14859 743 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
CCDC171-202ENST00000432954 CENPCQ03188 943 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 CTDSPL2Q05D32 466 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 CD300CQ08708 224 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 ACAP2Q15057 778 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 KRT24Q2M2I5 525 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 ANGPTL8Q6UXH0 198 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 IKBIPQ70UQ0 350 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 OTOP3Q7RTS5 596 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 HID1Q8IV36 788 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 ZFP28Q8NHY6 868 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 PPP4R1Q8TF05 950 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 VPS33AQ96AX1 596 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 TLCD1Q96CP7 247 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 ECSITQ9BQ95 431 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 HEMGNQ9BXL5 484 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 IFIH1Q9BYX4 1025 aaKnown RBP11.46□□□□□ -0.57
CCDC171-202ENST00000432954 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC171-202ENST00000432954 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 RRP7BPQ9NSQ0 103 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 RRN3Q9NYV6 651 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 PI4KBQ9UBF8 816 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 REV1Q9UBZ9 1251 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
CCDC171-202ENST00000432954 DISP3Q9P2K9 1392 aa11.46□□□□□ -0.58
CCDC171-202ENST00000432954 MYH1P12882 1939 aa11.46□□□□□ -0.58
CCDC171-202ENST00000432954 ADGRL1O94910 1474 aa11.46□□□□□ -0.58
CCDC171-202ENST00000432954 ABCC10Q5T3U5 1492 aa11.46□□□□□ -0.58
CCDC171-202ENST00000432954 ZNF804BA4D1E1 1349 aa11.46□□□□□ -0.58
CCDC171-202ENST00000432954 KDM3AQ9Y4C1 1321 aa11.46□□□□□ -0.58
CCDC171-202ENST00000432954 DCDC2CA8MYV0 355 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 hCG_1984214I3L0E3 225 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 AREL1O15033 823 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 PEX1O43933 1283 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 TCEA3O75764 348 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 SMIM18P0DKX4 95 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 RPS2P15880 293 aaKnown RBP11.45□□□□□ -0.58
CCDC171-202ENST00000432954 HCAR3P49019 387 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 NEK3P51956 506 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 AP2S1P53680 142 aaPredicted RBP11.45□□□□□ -0.58
CCDC171-202ENST00000432954 ECT2LQ008S8 904 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 GRIN1Q05586 938 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 PDE1CQ14123 709 aaPredicted RBP11.45□□□□□ -0.58
CCDC171-202ENST00000432954 RNF43Q68DV7 783 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 PGM2L1Q6PCE3 622 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 LIMS2Q7Z4I7 341 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 DPP9Q86TI2 863 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 UNC45BQ8IWX7 931 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 FBXL6Q8N531 539 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 FITM2Q8N6M3 262 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 TBC1D16Q8TBP0 767 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 GTF3C2Q8WUA4 911 aaPredicted RBP11.45□□□□□ -0.58
CCDC171-202ENST00000432954 MED15Q96RN5 788 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 ACAT2Q9BWD1 397 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 WNT5BQ9H1J7 359 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 INTS7Q9NVH2 962 aaKnown RBP11.45□□□□□ -0.58
CCDC171-202ENST00000432954 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 NUP50Q9UKX7 468 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 MYOM1P52179 1685 aa11.45□□□□□ -0.58
CCDC171-202ENST00000432954 KNDC1Q76NI1 1749 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms