RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 PAK2Q13177 524 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 PPP1R2P3Q6NXS1 205 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 DNAJB3Q8WWF6 145 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 TLL2Q9Y6L7 1015 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 PCNTO95613 3336 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 GOLGA6L10A0A0M3HER8 536 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 ADAM17P78536 824 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 ZNF200P98182 395 aaPredicted RBP20.81■□□□□ 0.92
VRK2-205ENST00000432057 SREBF2Q12772 1141 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 PLEKHA7Q6IQ23 1121 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 EMBQ6PCB8 327 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 ZIC5Q96T25 663 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 EIF2AQ9BY44 585 aaKnown RBP20.81■□□□□ 0.92
VRK2-205ENST00000432057 CELF4Q9BZC1 486 aaKnown RBP20.81■□□□□ 0.92
VRK2-205ENST00000432057 CXCL16Q9H2A7 254 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 ACBD3Q9H3P7 528 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 POLR3GO15318 223 aaPredicted RBP20.8■□□□□ 0.92
VRK2-205ENST00000432057 TTI1O43156 1089 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 TREHO43280 583 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 LSM8O95777 96 aaKnown RBP20.8■□□□□ 0.92
VRK2-205ENST00000432057 MMP8P22894 467 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 LACTBP83111 547 aaPredicted RBP20.8■□□□□ 0.92
VRK2-205ENST00000432057 GPS2Q13227 327 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 ORC1Q13415 861 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 MAMLD1Q13495 774 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 CLUL1Q15846 466 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 DAB2IPQ5VWQ8 1189 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 SLC27A1Q6PCB7 646 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 UBE2Q2Q8WVN8 375 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 CAVIN3Q969G5 261 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 KIF12Q96FN5 646 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 HMGXB4Q9UGU5 601 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 AGAP1Q9UPQ3 857 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 C2CD2Q9Y426 696 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 SCINQ9Y6U3 715 aa20.8■□□□□ 0.92
VRK2-205ENST00000432057 BHMG1C9JSJ3 638 aaPredicted RBP20.79■□□□□ 0.92
VRK2-205ENST00000432057 MYO1FO00160 1098 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 DARSP14868 501 aaKnown RBP20.79■□□□□ 0.92
VRK2-205ENST00000432057 CD19P15391 556 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 ATICP31939 592 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 RWDD2BP57060 319 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 TRPV1Q8NER1 839 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 CCDC26Q8TAB7 109 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 HPDLQ96IR7 371 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 MRPL47Q9HD33 250 aaKnown RBP20.79■□□□□ 0.92
VRK2-205ENST00000432057 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 DPP3Q9NY33 737 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 SNTG2Q9NY99 539 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 ITGA11Q9UKX5 1188 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 PCDHGC3Q9UN70 934 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 PROSCO94903 275 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 FAM153BP0C7A2 387 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 RAD23BP54727 409 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 CDC42EP1Q00587 391 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 FSCN1Q16658 493 aaKnown RBP20.79■□□□□ 0.92
VRK2-205ENST00000432057 FAM153CQ494X1 144 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 DENND1BQ6P3S1 775 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 TMEM35BQ8NCS4 154 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 TWNKQ96RR1 684 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 VRTNQ9H8Y1 702 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 FAM153AQ9UHL3 310 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 Q9Y3F1 56 aa20.79■□□□□ 0.92
VRK2-205ENST00000432057 SCN10AQ9Y5Y9 1956 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 MYADML2A6NDP7 307 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 KIF3CO14782 793 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 NOTUMQ6P988 496 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 DDX42Q86XP3 938 aaKnown RBP eCLIP20.78■□□□□ 0.92
VRK2-205ENST00000432057 ZDHHC14Q8IZN3 488 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 WDTC1Q8N5D0 677 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 WHAMMQ8TF30 809 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 CCDC102AQ96A19 550 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 TRIM51Q9BSJ1 452 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 ARHGAP39Q9C0H5 1083 aa20.78■□□□□ 0.92
VRK2-205ENST00000432057 ABT1Q9ULW3 272 aaKnown RBP20.78■□□□□ 0.92
VRK2-205ENST00000432057 TCRBV7S2A1N4TA0A589 114 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 TLR3O15455 904 aaKnown RBP20.77■□□□□ 0.92
VRK2-205ENST00000432057 PHF2O75151 1096 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 CALB1P05937 261 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 AKR1A1P14550 325 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 HSPA6P17066 643 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 CDH5P33151 784 aaPredicted RBP20.77■□□□□ 0.92
VRK2-205ENST00000432057 SLC1A1P43005 524 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 NNTQ13423 1086 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 MAATS1Q7Z4T9 603 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 APBB1IPQ7Z5R6 666 aaPredicted RBP20.77■□□□□ 0.92
VRK2-205ENST00000432057 NT5DC4Q86YG4 428 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 SLC13A5Q86YT5 568 aaPredicted RBP20.77■□□□□ 0.92
VRK2-205ENST00000432057 PRELID2Q8N945 189 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 SLC4A11Q8NBS3 891 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 TSEN2Q8NCE0 465 aaKnown RBP20.77■□□□□ 0.92
VRK2-205ENST00000432057 SMC1BQ8NDV3 1235 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 TMEM40Q8WWA1 233 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 FAXDC2Q96IV6 333 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 SNX27Q96L92 541 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 ELOVL4Q9GZR5 314 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 PARVAQ9NVD7 372 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 HES2Q9Y543 173 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 C17orf102A2RUQ5 167 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 CILPO75339 1184 aa20.77■□□□□ 0.92
VRK2-205ENST00000432057 AARSP49588 968 aaKnown RBP eCLIP20.77■□□□□ 0.928e-6■■■■■ 52.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms