RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 GLUD1P00367 558 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 PRKCSHP14314 528 aaPredicted RBP15.4■□□□□ 0.06
LAMA4-208ENST00000431543 EEF1GP26641 437 aaKnown RBP15.4■□□□□ 0.06
LAMA4-208ENST00000431543 OR1D2P34982 312 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 CBX2Q14781 532 aaPredicted RBP15.4■□□□□ 0.06
LAMA4-208ENST00000431543 NCAPHQ15003 741 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 FILIP1LQ4L180 1135 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 C9orf57Q5W0N0 161 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 CBWD2Q8IUF1 395 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 ADHFE1Q8IWW8 467 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 GPD1LQ8N335 351 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 BEST2Q8NFU1 509 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 ANP32BQ92688 251 aaKnown RBP15.4■□□□□ 0.06
LAMA4-208ENST00000431543 SUSD3Q96L08 255 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 TSPAN18Q96SJ8 248 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 PDE11AQ9HCR9 933 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 DZANK1Q9NVP4 752 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 DMAC2Q9NW81 257 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 DPP3Q9NY33 737 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 RBAKQ9NYW8 714 aaPredicted RBP15.4■□□□□ 0.06
LAMA4-208ENST00000431543 MTRRQ9UBK8 725 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 DERAQ9Y315 318 aa15.4■□□□□ 0.06
LAMA4-208ENST00000431543 TIMM13Q9Y5L4 95 aaPredicted RBP15.4■□□□□ 0.06
LAMA4-208ENST00000431543 ANO9A1A5B4 782 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 KCNJ18B7U540 433 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 PIRO00625 290 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 MAPK13O15264 365 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 XPOTO43592 962 aaKnown RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 IL18RAPO95256 599 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 SERPINC1P01008 464 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 TPM3P06753 285 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 MTIF2P46199 727 aaKnown RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 PLCB2Q00722 1185 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 POU5F1Q01860 360 aaKnown RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 MRPL58Q14197 206 aaKnown RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 KCNJ12Q14500 433 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 VARS2Q5ST30 1063 aaKnown RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 INTS8Q75QN2 995 aaKnown RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 ZC3H3Q8IXZ2 948 aaKnown RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 FAM186BQ8IYM0 893 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 GJD3Q8N144 294 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 RDH13Q8NBN7 331 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 SAMSN1Q9NSI8 373 aaKnown RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 ARMCX3Q9UH62 379 aaPredicted RBP15.39■□□□□ 0.05
LAMA4-208ENST00000431543 C2CD2Q9Y426 696 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 CDY1Q9Y6F8 540 aa15.39■□□□□ 0.05
LAMA4-208ENST00000431543 NCOR1O75376 2440 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 CCDC195A0A1B0GUA6 201 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 M0QZQ0 153 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 TBC1D4O60343 1298 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 STX10O60499 249 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 SP100P23497 879 aaPredicted RBP15.38■□□□□ 0.05
LAMA4-208ENST00000431543 SSTR3P32745 418 aaPredicted RBP15.38■□□□□ 0.05
LAMA4-208ENST00000431543 MRE11P49959 708 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 LILRA4P59901 499 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 TFAMQ00059 246 aaKnown RBP15.38■□□□□ 0.05
LAMA4-208ENST00000431543 CREMQ03060 361 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 ITIH3Q06033 890 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 SURF1Q15526 300 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 SNRNP35Q16560 246 aaKnown RBP15.38■□□□□ 0.05
LAMA4-208ENST00000431543 TCP11X2Q5H9J9 407 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 LMBRD2Q68DH5 695 aaPredicted RBP15.38■□□□□ 0.05
LAMA4-208ENST00000431543 CES5AQ6NT32 575 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 PDXDC1Q6P996 788 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 ANKS3Q6ZW76 656 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 KREMEN2Q8NCW0 462 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 EEF2KMTQ96G04 330 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 RPGRIP1Q96KN7 1286 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 MED15Q96RN5 788 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 POMKQ9H5K3 350 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 PRKAG3Q9UGI9 489 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 PCDHB8Q9UN66 801 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 BACE2Q9Y5Z0 518 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 PTPRJQ12913 1337 aa15.38■□□□□ 0.05
LAMA4-208ENST00000431543 SYN3O14994 580 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 CBFA2T2O43439 604 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 AKAP3O75969 853 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 AARSP49588 968 aaKnown RBP eCLIP15.37■□□□□ 0.05
LAMA4-208ENST00000431543 ARPP19P56211 112 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 RAB33AQ14088 237 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 CDKAL1Q5VV42 579 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 DSTYKQ6XUX3 929 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 GPR149Q86SP6 731 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 OR5B17Q8NGF7 314 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 CNOT6LQ96LI5 555 aaKnown RBP15.37■□□□□ 0.05
LAMA4-208ENST00000431543 PHF7Q9BWX1 381 aaPredicted RBP15.37■□□□□ 0.05
LAMA4-208ENST00000431543 SFXN1Q9H9B4 322 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 GRPEL1Q9HAV7 217 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 FBXL5Q9UKA1 691 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 SCN1AP35498 2009 aa15.37■□□□□ 0.05
LAMA4-208ENST00000431543 LOC730098B7Z3J9 87 aa15.36■□□□□ 0.05
LAMA4-208ENST00000431543 PES1O00541 588 aaKnown RBP15.36■□□□□ 0.05
LAMA4-208ENST00000431543 MARSP56192 900 aaKnown RBP15.36■□□□□ 0.05
LAMA4-208ENST00000431543 ENPEPQ07075 957 aa15.36■□□□□ 0.05
LAMA4-208ENST00000431543 HSP90AA4PQ58FG1 418 aa15.36■□□□□ 0.05
LAMA4-208ENST00000431543 ATAT1Q5SQI0 421 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms