RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 OVOS1Q6IE37 1185 aa18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 RSPO2Q6UXX9 243 aaPredicted RBP18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 CCDC149Q6ZUS6 474 aa18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 METTL23Q86XA0 190 aa18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 SMYD4Q8IYR2 804 aaPredicted RBP18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 OR5B17Q8NGF7 314 aa18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 CXorf38Q8TB03 319 aa18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 ERCC4Q92889 916 aaPredicted RBP18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 MAFFQ9ULX9 164 aa18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 TIMM13Q9Y5L4 95 aaPredicted RBP18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 PTPRJQ12913 1337 aa18.73■□□□□ 0.59
CTDSP1-203ENST00000431127 MAPK13O15264 365 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 GPR37L1O60883 481 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 PAPLNO95428 1278 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 HNRNPA1P09651 372 aaKnown RBP eCLIP18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 HOXA9P31269 272 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 ELF1P32519 619 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 PRCPP42785 496 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 ROR1Q01973 937 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 CEP135Q66GS9 1140 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 LMBRD2Q68DH5 695 aaPredicted RBP18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 BORCS6Q96GS4 357 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 SIX4Q9UIU6 781 aa18.72■□□□□ 0.59
CTDSP1-203ENST00000431127 ABLIM3O94929 683 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 C8AP07357 584 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 ATF2P15336 505 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 SSTR3P32745 418 aaPredicted RBP18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 ARPP19P56211 112 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 CLDN10P78369 228 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 BFSP1Q12934 665 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 ADAM9Q13443 819 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 ZCWPW2Q504Y3 356 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 TMEM31Q5JXX7 168 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 PPM1LQ5SGD2 360 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 TRAPPC11Q7Z392 1133 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 THEM5Q8N1Q8 247 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 TMC2Q8TDI7 906 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 PARD3BQ8TEW8 1205 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 TSG101Q99816 390 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 PRKD2Q9BZL6 878 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 GDAP2Q9NXN4 497 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 MAN1B1Q9UKM7 699 aa18.71■□□□□ 0.59
CTDSP1-203ENST00000431127 WDR27A2RRH5 827 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 C19orf67A6NJJ6 358 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 PSMA7O14818 248 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 HUS1O60921 280 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 RFPL2O75678 378 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 WEE2P0C1S8 567 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 CPB1P15086 417 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 PSMC2P35998 433 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 CASP4P49662 377 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 ENPEPQ07075 957 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 CENPPQ6IPU0 288 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 INTS8Q75QN2 995 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 ADSSL1Q8N142 457 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 SLC7A14Q8TBB6 771 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 SMG7Q92540 1137 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 HPDLQ96IR7 371 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 PIDD1Q9HB75 910 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 C11orf16Q9NQ32 467 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 AFF4Q9UHB7 1163 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 NR2E1Q9Y466 385 aa18.7■□□□□ 0.58
CTDSP1-203ENST00000431127 PLXNA3P51805 1871 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 PRRG1O14668 218 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 IKBKBO14920 756 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 PHACTR2O75167 634 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 XYLBO75191 536 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 POU2F2P09086 479 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 TRPC3Q13507 836 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 WSCD1Q658N2 575 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 DPH6Q7L8W6 267 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 TMEM86AQ8N2M4 240 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 SPATA18Q8TC71 538 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 ZNF707Q96C28 371 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 DHTKD1Q96HY7 919 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 FAM84AQ96KN4 292 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 RPGRIP1Q96KN7 1286 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 MKNK1Q9BUB5 465 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 GZF1Q9H116 711 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 POMKQ9H5K3 350 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 SCN1AP35498 2009 aa18.69■□□□□ 0.58
CTDSP1-203ENST00000431127 LRRIQ3A6PVS8 624 aaPredicted RBP18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 LOC730098B7Z3J9 87 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 GOLGA6L22H0YM25 854 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 CETN3O15182 167 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 AKAP3O75969 853 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 KRT13P13646 458 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 LRRC63Q05C16 580 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 SMARCB1Q12824 385 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 GPR17Q13304 367 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 ISM2Q6H9L7 571 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 FAM186BQ8IYM0 893 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 TCEAL8Q8IYN2 117 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 TOP6BLQ8N6T0 577 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 TRIML1Q8N9V2 468 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 ZNF516Q92618 1163 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 CYP4F11Q9HBI6 524 aa18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 WDR6Q9NNW5 1121 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-203ENST00000431127 CDH22Q9UJ99 828 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms