RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 TGFB1I1O43294 461 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 XPOTO43592 962 aaKnown RBP13.54□□□□□ -0.24
SMPD4-204ENST00000430682 SOAT2O75908 522 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 CYP11A1P05108 521 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 CPB1P15086 417 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 TYMPP19971 482 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 GARTP22102 1010 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 AFMP43652 599 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 ASIC1P78348 528 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 NHLH1Q02575 133 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 LMBRD2Q68DH5 695 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-204ENST00000430682 OVOS1Q6IE37 1185 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 SUGP1Q8IWZ8 645 aaKnown RBP13.54□□□□□ -0.24
SMPD4-204ENST00000430682 C1orf127Q8N9H9 656 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 ZNF507Q8TCN5 953 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 GPR152Q8TDT2 470 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 LEO1Q8WVC0 666 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-204ENST00000430682 MCRS1Q96EZ8 462 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 CORO1BQ9BR76 489 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 LRRC3Q9BY71 257 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 DNAJC25Q9H1X3 360 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 CUEDC2Q9H467 287 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 PDE11AQ9HCR9 933 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 SERTAD1Q9UHV2 236 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 SLC27A5Q9Y2P5 690 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 PTPRDP23468 1912 aa13.54□□□□□ -0.24
SMPD4-204ENST00000430682 ANAPC1Q9H1A4 1944 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 A0A1B0GVL5 298 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 ACTN4O43707 911 aaKnown RBP13.53□□□□□ -0.24
SMPD4-204ENST00000430682 KLRC4O43908 158 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 EXTL3O43909 919 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 IL18RAPO95256 599 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 LRG1P02750 347 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 GJA1P17302 382 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 PTPN2P17706 415 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 ELF1P32519 619 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 POU5F1Q01860 360 aaKnown RBP13.53□□□□□ -0.24
SMPD4-204ENST00000430682 TWF1Q12792 350 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 DUSP4Q13115 394 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 GPR17Q13304 367 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 ALCAMQ13740 583 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 FAM26FQ5R3K3 315 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 ATL3Q6DD88 541 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 CENPPQ6IPU0 288 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 RTL10Q7L3V2 364 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 LRRTM3Q86VH5 581 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 CBWD2Q8IUF1 395 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 SIX5Q8N196 739 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 ATAD1Q8NBU5 361 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 NOC3LQ8WTT2 800 aaKnown RBP13.53□□□□□ -0.24
SMPD4-204ENST00000430682 SCFD1Q8WVM8 642 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 ZSWIM3Q96MP5 696 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 KXD1Q9BQD3 176 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 GZF1Q9H116 711 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-204ENST00000430682 AVENQ9NQS1 362 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-204ENST00000430682 RBAKQ9NYW8 714 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-204ENST00000430682 SIX4Q9UIU6 781 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 KCNH3Q9ULD8 1083 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 MRPS23Q9Y3D9 190 aaKnown RBP13.53□□□□□ -0.24
SMPD4-204ENST00000430682 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
SMPD4-204ENST00000430682 NUP210Q8TEM1 1887 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-204ENST00000430682 MTMR11A4FU01 709 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 CYB561D2O14569 222 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 CLIC2O15247 247 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 HCRTO43612 131 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 ITGB3P05106 788 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 SRFP11831 508 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 ODC1P11926 461 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 PDIA4P13667 645 aaKnown RBP13.52□□□□□ -0.25
SMPD4-204ENST00000430682 FCARP24071 287 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 POLR2BP30876 1174 aaKnown RBP13.52□□□□□ -0.25
SMPD4-204ENST00000430682 TAF6P49848 677 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 GPC5P78333 572 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 TFAMQ00059 246 aaKnown RBP13.52□□□□□ -0.25
SMPD4-204ENST00000430682 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 UNC13DQ70J99 1090 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 USP37Q86T82 979 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 GPD1LQ8N335 351 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 FLCNQ8NFG4 579 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 OR5B17Q8NGF7 314 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 PYM1Q9BRP8 204 aaKnown RBP13.52□□□□□ -0.25
SMPD4-204ENST00000430682 SLC39A2Q9NP94 309 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 CFAP45Q9UL16 551 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 CA14Q9ULX7 337 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 AGAP1Q9UPQ3 857 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 HPSEQ9Y251 543 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 ZFP37Q9Y6Q3 630 aaPredicted RBP13.52□□□□□ -0.25
SMPD4-204ENST00000430682 NCANO14594 1321 aa13.52□□□□□ -0.25
SMPD4-204ENST00000430682 RIF1Q5UIP0 2472 aaKnown RBP13.51□□□□□ -0.25
SMPD4-204ENST00000430682 OR6C75A6NL08 312 aa13.51□□□□□ -0.25
SMPD4-204ENST00000430682 KPNA7A9QM74 516 aa13.51□□□□□ -0.25
SMPD4-204ENST00000430682 TULP1O00294 542 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-204ENST00000430682 PFKFB1P16118 471 aa13.51□□□□□ -0.25
SMPD4-204ENST00000430682 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-204ENST00000430682 MYBPC2Q14324 1141 aa13.51□□□□□ -0.25
SMPD4-204ENST00000430682 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
SMPD4-204ENST00000430682 TANGO2Q6ICL3 276 aa13.51□□□□□ -0.25
SMPD4-204ENST00000430682 ARMCX5Q6P1M9 558 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms