RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CYB5D1Q6P9G0 228 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 CCDC89Q8N998 374 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 PSPC1Q8WXF1 523 aaKnown RBP9.25□□□□□ -0.93
GABPB1-205ENST00000429662 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 KREMEN1Q96MU8 473 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 MYCBPQ99417 103 aaPredicted RBP9.25□□□□□ -0.93
GABPB1-205ENST00000429662 TRAIPQ9BWF2 469 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 IKZF4Q9H2S9 585 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 ADAM7Q9H2U9 754 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 PPCSQ9HAB8 311 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 MRPL47Q9HD33 250 aaKnown RBP9.25□□□□□ -0.93
GABPB1-205ENST00000429662 MYPNQ86TC9 1320 aa9.25□□□□□ -0.93
GABPB1-205ENST00000429662 DCDC2CA8MYV0 355 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 TCP10L2B9ZVM9 353 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 DNM1LO00429 736 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 SLC16A4O15374 487 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 THAP12O43422 761 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 MGRN1O60291 552 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 SUN1O94901 812 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 TTC4O95801 387 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 VIMP08670 466 aaKnown RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 EZRP15311 586 aaKnown RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ATF2P15336 505 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 SYN1P17600 705 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CNGA1P29973 690 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 UBXN2AP68543 259 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CYP24A1Q07973 514 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CAMK2BQ13554 666 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 STAT4Q14765 748 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 PREPLQ4J6C6 727 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 BRDTQ58F21 947 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 XKR9Q5GH70 373 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 WDR44Q5JSH3 913 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 WLSQ5T9L3 541 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 RHBDF2Q6PJF5 856 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CRELD2Q6UXH1 353 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 PPP1R21Q6ZMI0 780 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 TRPM8Q7Z2W7 1104 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 NLRX1Q86UT6 975 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 SLC47A2Q86VL8 602 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 C7orf61Q8IZ16 206 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 GPD1LQ8N335 351 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 TMEM161BQ8NDZ6 487 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 MCPH1Q8NEM0 835 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 MDM1Q8TC05 714 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 PLEKHO2Q8TD55 490 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 SYTL5Q8TDW5 730 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 DYDC1Q8WWB3 177 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CLEC4DQ8WXI8 215 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 DDX1Q92499 740 aaKnown RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ATP6V0A1Q93050 837 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 KMT5AQ9NQR1 393 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 C1orf112Q9NSG2 853 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 HAUS2Q9NVX0 235 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 LGALS13Q9UHV8 139 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CPA4Q9UI42 421 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 SLC12A4Q9UP95 1085 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CTDP1Q9Y5B0 961 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 PCDHB2Q9Y5E7 798 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 DDX39AO00148 427 aaKnown RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 BACH1O14867 736 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 IRF6O14896 467 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ZBED4O75132 1171 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ADRB2P07550 413 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ABHD2P08910 425 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 UNGP13051 313 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 TAL1P17542 331 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 COPB2P35606 906 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 MARCKSL1P49006 195 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CLDN10P78369 228 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 IFI35P80217 286 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 KRT17Q04695 432 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 NEDD9Q14511 834 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CCNG2Q16589 344 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 SUPT20HL1Q3ZLR7 823 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 FAM102BQ5T8I3 360 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ARHGEF18Q6ZSZ5 1173 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 MAEAQ7L5Y9 396 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 EXOC3L1Q86VI1 746 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 RHOT1Q8IXI2 618 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 LRRC34Q8IZ02 419 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 MCOLN2Q8IZK6 566 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ZDHHC14Q8IZN3 488 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CCDC63Q8NA47 563 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ARHGEF2Q92974 986 aaKnown RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ZKSCAN4Q969J2 545 aaPredicted RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 GPRASP2Q96D09 838 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 IFT74Q96LB3 600 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 TTC25Q96NG3 672 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 SCLT1Q96NL6 688 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 PRMT1Q99873 361 aaKnown RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 MOV10L1Q9BXT6 1211 aaKnown RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 DCLK3Q9C098 648 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 KIAA1683Q9H0B3 1180 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 CDC42EP4Q9H3Q1 356 aaKnown RBP9.24□□□□□ -0.93
GABPB1-205ENST00000429662 UBN1Q9NPG3 1134 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ASIC3Q9UHC3 531 aa9.24□□□□□ -0.93
GABPB1-205ENST00000429662 ANAPC5Q9UJX4 755 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms