RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 ALDH2P05091 517 aa18.28■□□□□ 0.52
LINC00887-203ENST00000429578 ATP2A2P16615 1042 aaKnown RBP18.28■□□□□ 0.52
LINC00887-203ENST00000429578 IGFBP6P24592 240 aaPredicted RBP18.28■□□□□ 0.52
LINC00887-203ENST00000429578 AARSP49588 968 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC00887-203ENST00000429578 BTG3Q14201 252 aaPredicted RBP18.28■□□□□ 0.52
LINC00887-203ENST00000429578 ARID5BQ14865 1188 aa18.28■□□□□ 0.52
LINC00887-203ENST00000429578 HERC6Q8IVU3 1022 aa18.28■□□□□ 0.52
LINC00887-203ENST00000429578 CWH43Q9H720 699 aa18.28■□□□□ 0.52
LINC00887-203ENST00000429578 KIF4AO95239 1232 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 GOLGA8FQ08AF8 430 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 GOLGA8DPQ0D2H9 430 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 PDXDC1Q6P996 788 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 CD300LGQ6UXG3 332 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 OR8K1Q8NGG5 319 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 SHC3Q92529 594 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 MMS19Q96T76 1030 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 DNAJC7Q99615 494 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 ZBED2Q9BTP6 218 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 FAM124BQ9H5Z6 455 aaPredicted RBP18.27■□□□□ 0.52
LINC00887-203ENST00000429578 CYP3A43Q9HB55 503 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 ABHD10Q9NUJ1 306 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 INSL6Q9Y581 213 aa18.27■□□□□ 0.52
LINC00887-203ENST00000429578 FOXN3O00409 490 aaPredicted RBP18.26■□□□□ 0.51
LINC00887-203ENST00000429578 NRP1O14786 923 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 GALTP07902 379 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 WEE2P0C1S8 567 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 SLC11A1P49279 550 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 SMYD5Q6GMV2 418 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 SCARA5Q6ZMJ2 495 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 DPH6Q7L8W6 267 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 FAN1Q9Y2M0 1017 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 ITGB1P05556 798 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 PTMAP06454 111 aaKnown RBP18.26■□□□□ 0.51
LINC00887-203ENST00000429578 ACO1P21399 889 aaKnown RBP18.26■□□□□ 0.51
LINC00887-203ENST00000429578 SOX5P35711 763 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 STAT1P42224 750 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 ALDH7A1P49419 539 aaKnown RBP18.26■□□□□ 0.51
LINC00887-203ENST00000429578 BCAR1P56945 870 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 YWHAEP62258 255 aaKnown RBP18.26■□□□□ 0.51
LINC00887-203ENST00000429578 SOWAHAQ2M3V2 549 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 TIGD5Q53EQ6 642 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 FMNL3Q8IVF7 1028 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 UBR7Q8N806 425 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 SYN2Q92777 582 aaPredicted RBP18.26■□□□□ 0.51
LINC00887-203ENST00000429578 RAD9AQ99638 391 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 COLEC11Q9BWP8 271 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 TTYH1Q9H313 450 aaPredicted RBP18.26■□□□□ 0.51
LINC00887-203ENST00000429578 SMYD3Q9H7B4 428 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 CISHQ9NSE2 258 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 AIPL1Q9NZN9 384 aa18.26■□□□□ 0.51
LINC00887-203ENST00000429578 PRG3Q9Y2Y8 225 aaPredicted RBP18.26■□□□□ 0.51
LINC00887-203ENST00000429578 F8W810 466 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 HUS1O60921 280 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 HNRNPH3P31942 346 aaKnown RBP18.25■□□□□ 0.51
LINC00887-203ENST00000429578 CDH8P55286 799 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 TSR1Q2NL82 804 aaKnown RBP18.25■□□□□ 0.51
LINC00887-203ENST00000429578 SFMBT2Q5VUG0 894 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 DSTYKQ6XUX3 929 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 LIMS2Q7Z4I7 341 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 FAM71AQ8IYT1 594 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 TTC39CQ8N584 583 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 TOP6BLQ8N6T0 577 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 APPL2Q8NEU8 664 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 HASPINQ8TF76 798 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 SENP8Q96LD8 212 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 PANX2Q96RD6 677 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 CDX2Q99626 313 aaPredicted RBP18.25■□□□□ 0.51
LINC00887-203ENST00000429578 SDCBP2Q9H190 292 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 CNTN6Q9UQ52 1028 aa18.25■□□□□ 0.51
LINC00887-203ENST00000429578 MRPL42Q9Y6G3 142 aaKnown RBP18.25■□□□□ 0.51
LINC00887-203ENST00000429578 MYH10P35580 1976 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 TMEM265A0A087WTH1 108 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 CARNS1A5YM72 827 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 M0QZQ0 153 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 CYB561D2O14569 222 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 TACC1O75410 805 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 TADA2AO75478 443 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 PNMA6AP0CW24 399 aaPredicted RBP18.24■□□□□ 0.51
LINC00887-203ENST00000429578 CD58P19256 250 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 DNAJB2P25686 324 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 BRCC3P46736 316 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 RAP1GAPP47736 663 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 SPOUT1Q5T280 376 aaKnown RBP18.24■□□□□ 0.51
LINC00887-203ENST00000429578 SP7Q8TDD2 431 aaPredicted RBP18.24■□□□□ 0.51
LINC00887-203ENST00000429578 SUSD3Q96L08 255 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 MARCH5Q9NX47 278 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 ADAM28Q9UKQ2 775 aa18.24■□□□□ 0.51
LINC00887-203ENST00000429578 PLXNA4Q9HCM2 1894 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 TRAPPC3O43617 180 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 TLL1O43897 1013 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 FAM163BP0C2L3 166 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 LAG3P18627 525 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 INCA1Q0VD86 236 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 E4F1Q66K89 784 aaPredicted RBP18.23■□□□□ 0.51
LINC00887-203ENST00000429578 TMEM270Q6UE05 265 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 KCNT2Q6UVM3 1135 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 FIBCD1Q8N539 461 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 L1RE1Q9UN81 338 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 PCDHB4Q9Y5E5 795 aa18.23■□□□□ 0.51
LINC00887-203ENST00000429578 ARHGEF37A1IGU5 675 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 226.7 ms