RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 IQCF3P0C7M6 154 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 ALDH3A1P30838 453 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 HOXD13P35453 343 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 CD151P48509 253 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 PMS1P54277 932 aaKnown RBP12.16□□□□□ -0.46
CECR3-201ENST00000428828 FAAP100Q0VG06 881 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 KIF5AQ12840 1032 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 PAK1Q13153 545 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 ALCAMQ13740 583 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 TRIP11Q15643 1979 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 MAPK6Q16659 721 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 GUF1Q8N442 669 aaKnown RBP12.16□□□□□ -0.46
CECR3-201ENST00000428828 TET1Q8NFU7 2136 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 ZNF507Q8TCN5 953 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 STRA6Q9BX79 667 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 CCDC113Q9H0I3 377 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 ST6GALNAC4Q9H4F1 302 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 WDR35Q9P2L0 1181 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
CECR3-201ENST00000428828 GRID2IPA4D2P6 1211 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 DIAPH2O60879 1101 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 CLTBP09497 229 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 DARSP14868 501 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 ABL2P42684 1182 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 EFNA5P52803 228 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 CRYBB1P53674 252 aaPredicted RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 CDC42EP1Q00587 391 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 MGAT3Q09327 533 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 SFSWAPQ12872 951 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 KNOP1Q1ED39 458 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 ANKRD20A2Q5SQ80 823 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 ANKRD20A1Q5TYW2 823 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 C1orf53Q5VUE5 145 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 ANKRD20A3Q5VUR7 823 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 WDR59Q6PJI9 974 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 CATSPER4Q7RTX7 472 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 CDR2LQ86X02 465 aaPredicted RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 MAP4K3Q8IVH8 894 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 GBP7Q8N8V2 638 aaPredicted RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 NOC3LQ8WTT2 800 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 RAPGEF5Q92565 580 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 LRRC45Q96CN5 670 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 CHMP6Q96FZ7 201 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 EEF2KMTQ96G04 330 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 CPB2Q96IY4 423 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 TRAPPC9Q96Q05 1148 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 OSBPL1AQ9BXW6 950 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 SEMA6BQ9H3T3 888 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 HIPK3Q9H422 1215 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 ANKFY1Q9P2R3 1169 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 CITO14578 2027 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 H0YGN5 161 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 TULP1O00294 542 aaPredicted RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 CLIC2O15247 247 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 HARSP12081 509 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 NQO1P15559 274 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 EIF4BP23588 611 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 MATR3P43243 847 aaKnown RBP eCLIP12.15□□□□□ -0.46
CECR3-201ENST00000428828 LIG4P49917 911 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 BFSP2Q13515 415 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 PRPF4BQ13523 1007 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 BMT2Q1RMZ1 405 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 TCP11X2Q5H9J9 407 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 SPDYCQ5MJ68 293 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 LRRC8DQ7L1W4 858 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 PIGWQ7Z7B1 504 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 UBE2Q1Q7Z7E8 422 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 P2RX5Q93086 422 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 NAF1Q96HR8 494 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 DHTKD1Q96HY7 919 aaPredicted RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 TOX2Q96NM4 488 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 TARS2Q9BW92 718 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 NFKBIZQ9BYH8 718 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 KCTD10Q9H3F6 313 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 TMEM134Q9H6X4 195 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 TMEM206Q9H813 350 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 TMEM39AQ9NV64 488 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 EXOC7Q9UPT5 735 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 NOC2LQ9Y3T9 749 aaKnown RBP12.15□□□□□ -0.46
CECR3-201ENST00000428828 NFS1Q9Y697 457 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 ANK1P16157 1881 aa12.15□□□□□ -0.46
CECR3-201ENST00000428828 TTC26A0AVF1 554 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 ANKRD63C9JTQ0 380 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 PENKP01210 267 aaPredicted RBP12.14□□□□□ -0.47
CECR3-201ENST00000428828 RPLP2P05387 115 aaKnown RBP12.14□□□□□ -0.47
CECR3-201ENST00000428828 PYGBP11216 843 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 ATP2A2P16615 1042 aaKnown RBP12.14□□□□□ -0.47
CECR3-201ENST00000428828 CCNE1P24864 410 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 CYP2C18P33260 490 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 PPP1R2P41236 205 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 CCL23P55773 120 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 POU5F1BQ06416 359 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 MTMR3Q13615 1198 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 COBLL1Q53SF7 1204 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 NUGGCQ68CJ6 796 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 ANKRD40Q6AI12 368 aa12.14□□□□□ -0.47
CECR3-201ENST00000428828 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
CECR3-201ENST00000428828 LMNTD2Q8IXW0 634 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms