RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 RIF1Q5UIP0 2472 aaKnown RBP18.5■□□□□ 0.55
TRIM39-209ENST00000428728 MTMR11A4FU01 709 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 MYMKA6NI61 221 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 FAM170BA6NMN3 283 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 MOSPD3O75425 235 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 SP9P0CG40 484 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 TARSP26639 723 aaKnown RBP18.5■□□□□ 0.55
TRIM39-209ENST00000428728 CDR1P51861 262 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 EPHA5P54756 1037 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 PLD1Q13393 1074 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 SLFN12LQ6IEE8 588 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 LEMD2Q8NC56 503 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 SHKBP1Q8TBC3 707 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 DNAJC25Q9H1X3 360 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 ST6GALNAC4Q9H4F1 302 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 MRPL44Q9H9J2 332 aaKnown RBP18.5■□□□□ 0.55
TRIM39-209ENST00000428728 SPATA6Q9NWH7 488 aaPredicted RBP18.5■□□□□ 0.55
TRIM39-209ENST00000428728 SLC27A5Q9Y2P5 690 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 DERAQ9Y315 318 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 CFAP54Q96N23 3096 aa18.5■□□□□ 0.55
TRIM39-209ENST00000428728 NCANO14594 1321 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 SOAT2O75908 522 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 MICAL2O94851 1124 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 EPHB3P54753 998 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 GPR17Q13304 367 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 MYBPC2Q14324 1141 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 VITQ6UXI7 678 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 SV2BQ7L1I2 683 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 ZNF720Q7Z2F6 126 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 TMC8Q8IU68 726 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 EFCAB13Q8IY85 973 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 ATAD1Q8NBU5 361 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 OR10T2Q8NGX3 314 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 ZSCAN18Q8TBC5 510 aaPredicted RBP18.49■□□□□ 0.55
TRIM39-209ENST00000428728 DNASE1L2Q92874 299 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 SMARCD2Q92925 531 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 HVCN1Q96D96 273 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 USP28Q96RU2 1077 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 TRMT61BQ9BVS5 477 aaKnown RBP18.49■□□□□ 0.55
TRIM39-209ENST00000428728 SEL1LQ9UBV2 794 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 C2CD2Q9Y426 696 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 STYXL1Q9Y6J8 313 aa18.49■□□□□ 0.55
TRIM39-209ENST00000428728 A0A1W2PRU2 124 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 ANO9A1A5B4 782 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 PIRO00625 290 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 PPP1R37O75864 691 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 GCNT3O95395 438 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 IDEP14735 1019 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 GAP43P17677 238 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 GDI1P31150 447 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 VIPR2P41587 438 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 STAT6P42226 847 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 ALDH1A3P47895 512 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 KCNA1Q09470 495 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 CENPPQ6IPU0 288 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 ARMCX5Q6P1M9 558 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 ZC3H14Q6PJT7 736 aaKnown RBP18.48■□□□□ 0.55
TRIM39-209ENST00000428728 DNAJC19Q96DA6 116 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 PYM1Q9BRP8 204 aaKnown RBP18.48■□□□□ 0.55
TRIM39-209ENST00000428728 OSBPL6Q9BZF3 934 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 ASB7Q9H672 318 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 DPP3Q9NY33 737 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 NDRG2Q9UN36 371 aaKnown RBP18.48■□□□□ 0.55
TRIM39-209ENST00000428728 MTMR6Q9Y217 621 aa18.48■□□□□ 0.55
TRIM39-209ENST00000428728 DMDP11532 3685 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 LAMTOR5O43504 91 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 LMNAP02545 664 aaKnown RBP18.47■□□□□ 0.55
TRIM39-209ENST00000428728 PSMC3P17980 439 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 TAF6P49848 677 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 CASP5P51878 434 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 SLC39A12Q504Y0 691 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 STXBP5Q5T5C0 1151 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 CRELD2Q6UXH1 353 aaPredicted RBP18.47■□□□□ 0.55
TRIM39-209ENST00000428728 ZNF852Q6ZMS4 543 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 MAML2Q8IZL2 1156 aaPredicted RBP18.47■□□□□ 0.55
TRIM39-209ENST00000428728 SAAL1Q96ER3 474 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 ACCSQ96QU6 501 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 SEPT5Q99719 369 aaPredicted RBP18.47■□□□□ 0.55
TRIM39-209ENST00000428728 PANK2Q9BZ23 570 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 ZNF334Q9HCZ1 680 aaPredicted RBP18.47■□□□□ 0.55
TRIM39-209ENST00000428728 EXOC7Q9UPT5 735 aa18.47■□□□□ 0.55
TRIM39-209ENST00000428728 A0A087X0B3 334 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 CYB561D2O14569 222 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 CYP11A1P05108 521 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 ADSSP30520 456 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 POSTNQ15063 836 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 L1TD1Q5T7N2 865 aaKnown RBP18.46■□□□□ 0.55
TRIM39-209ENST00000428728 CCDC73Q6ZRK6 1079 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 METTL23Q86XA0 190 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 PDILTQ8N807 584 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 ZSWIM2Q8NEG5 633 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 FAM200AQ8TCP9 573 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 NOC3LQ8WTT2 800 aaKnown RBP18.46■□□□□ 0.55
TRIM39-209ENST00000428728 DEPDC1BQ8WUY9 529 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 IRF7Q92985 503 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 INTS4Q96HW7 963 aaKnown RBP18.46■□□□□ 0.55
TRIM39-209ENST00000428728 FAM213AQ9BRX8 229 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 LRRC3Q9BY71 257 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 FGFBP2Q9BYJ0 223 aa18.46■□□□□ 0.55
TRIM39-209ENST00000428728 DSEQ9UL01 958 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms