RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 TAB3Q8N5C8 712 aaPredicted RBP16.65■□□□□ 0.26
GHDC-203ENST00000428494 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.65■□□□□ 0.26
GHDC-203ENST00000428494 GRAMD1AQ96CP6 724 aa16.65■□□□□ 0.26
GHDC-203ENST00000428494 CFAP57Q96MR6 1250 aa16.65■□□□□ 0.26
GHDC-203ENST00000428494 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
GHDC-203ENST00000428494 APOBEC3GQ9HC16 384 aaKnown RBP16.65■□□□□ 0.26
GHDC-203ENST00000428494 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
GHDC-203ENST00000428494 STARD13Q9Y3M8 1113 aa16.65■□□□□ 0.26
GHDC-203ENST00000428494 CNTNAP1P78357 1384 aa16.65■□□□□ 0.26
GHDC-203ENST00000428494 LIASO43766 372 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 GTF2H1P32780 548 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 NLRP11P59045 1033 aaKnown RBP16.64■□□□□ 0.25
GHDC-203ENST00000428494 NOMO3P69849 1222 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 CCDC15Q0P6D6 951 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 PTP4A2Q12974 167 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 SETDB1Q15047 1291 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 C15orf39Q6ZRI6 1047 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 NIPA1Q7RTP0 329 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 BBOF1Q8ND07 529 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 EXD1Q8NHP7 514 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 FAM151AQ8WW52 585 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 TRIM6Q9C030 488 aaPredicted RBP16.64■□□□□ 0.25
GHDC-203ENST00000428494 DEFB129Q9H1M3 183 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 PCDHB4Q9Y5E5 795 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 NUMBLQ9Y6R0 609 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 WDR91A4D1P6 747 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 WDR64B1ANS9 1081 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 PLA2G6O60733 806 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 RAD17O75943 681 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 VNN1O95497 513 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 ACO1P21399 889 aaKnown RBP16.64■□□□□ 0.25
GHDC-203ENST00000428494 SKIV2L2P42285 1042 aaKnown RBP16.64■□□□□ 0.25
GHDC-203ENST00000428494 WDR44Q5JSH3 913 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 LIN9Q5TKA1 542 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 RMDN3Q96TC7 470 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 MAK16Q9BXY0 300 aaKnown RBP16.64■□□□□ 0.25
GHDC-203ENST00000428494 TXLNGQ9NUQ3 528 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 SAE1Q9UBE0 346 aaPredicted RBP16.64■□□□□ 0.25
GHDC-203ENST00000428494 GABBR1Q9UBS5 961 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 IVNS1ABPQ9Y6Y0 642 aa16.64■□□□□ 0.25
GHDC-203ENST00000428494 F8VP50 259 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 DNALI1O14645 258 aaPredicted RBP16.63■□□□□ 0.25
GHDC-203ENST00000428494 MAGEB2O15479 319 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 IFNB1P01574 187 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 EPHB2P29323 1055 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 GNA15P30679 374 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 PIK3CAP42336 1068 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 YARSP54577 528 aaKnown RBP16.63■□□□□ 0.25
GHDC-203ENST00000428494 SPARCL1Q14515 664 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 ENOSF1Q7L5Y1 443 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 SLC7A6OSQ96CW6 309 aaPredicted RBP16.63■□□□□ 0.25
GHDC-203ENST00000428494 SPDL1Q96EA4 605 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 ZBTB45Q96K62 511 aaPredicted RBP16.63■□□□□ 0.25
GHDC-203ENST00000428494 SMC6Q96SB8 1091 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 NTPCRQ9BSD7 190 aaKnown RBP16.63■□□□□ 0.25
GHDC-203ENST00000428494 TMEM121Q9BTD3 319 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 ANKEF1Q9NU02 776 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 USH1CQ9Y6N9 552 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 H0Y3Z8 333 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 ABHD2P08910 425 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 ABL2P42684 1182 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 EFTUD2Q15029 972 aaKnown RBP eCLIP16.63■□□□□ 0.255e-8■□□□□ 11.1
GHDC-203ENST00000428494 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 ZBTB41Q5SVQ8 909 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 FAM182AQ5T1J6 154 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 TRIM68Q6AZZ1 485 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 USP37Q86T82 979 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 ABRAQ8N0Z2 381 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 FAM13CQ8NE31 585 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 MICAL1Q8TDZ2 1067 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 TRIM11Q96F44 468 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 FNBP1Q96RU3 617 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 TIPINQ9BVW5 301 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 TBC1D10AQ9BXI6 508 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 LRMDAQ9H2I8 198 aa16.63■□□□□ 0.25
GHDC-203ENST00000428494 EDF1O60869 148 aaKnown RBP16.62■□□□□ 0.25
GHDC-203ENST00000428494 C4BPAP04003 597 aaKnown RBP16.62■□□□□ 0.25
GHDC-203ENST00000428494 PLCB3Q01970 1234 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 ZACNQ401N2 412 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 SEZ6Q53EL9 994 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 PLEKHA7Q6IQ23 1121 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 NLRX1Q86UT6 975 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 LONP2Q86WA8 852 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 ZNF677Q86XU0 584 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 LRRC8CQ8TDW0 803 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 CNKSR1Q969H4 720 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 RAB3IPQ96QF0 476 aaPredicted RBP16.62■□□□□ 0.25
GHDC-203ENST00000428494 XPNPEP1Q9NQW7 623 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 ZNF646O15015 1829 aaPredicted RBP16.62■□□□□ 0.25
GHDC-203ENST00000428494 ZNF541Q9H0D2 1346 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 MYH9P35579 1960 aaKnown RBP16.62■□□□□ 0.25
GHDC-203ENST00000428494 IRF6O14896 467 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 KRT4P19013 534 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 PDIA2Q13087 525 aaKnown RBP16.62■□□□□ 0.25
GHDC-203ENST00000428494 DLGAP5Q15398 846 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 TAF11Q15544 211 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 PDK4Q16654 411 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 PLEKHG4Q58EX7 1191 aa16.62■□□□□ 0.25
GHDC-203ENST00000428494 ILDR2Q71H61 639 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms