RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 KAT2BQ92831 832 aa10.22□□□□□ -0.77
SNX13-203ENST00000428135 SPATC1LQ9H0A9 340 aa10.22□□□□□ -0.77
SNX13-203ENST00000428135 APOBEC2Q9Y235 224 aaKnown RBP10.22□□□□□ -0.77
SNX13-203ENST00000428135 PDS5AQ29RF7 1337 aaKnown RBP10.22□□□□□ -0.77
SNX13-203ENST00000428135 ADGRA2Q96PE1 1338 aa10.22□□□□□ -0.77
SNX13-203ENST00000428135 CTIFO43310 598 aaKnown RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 BRAFP15056 766 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 TAF6P49848 677 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 ARHGDIAP52565 204 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 GTF2H3Q13889 308 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 SNCBQ16143 134 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 NUDCD3Q8IVD9 361 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 DCP1BQ8IZD4 617 aaKnown RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 SYT2Q8N9I0 419 aaPredicted RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 P2RX7Q99572 595 aaKnown RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 Q9H521 79 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 MID2Q9UJV3 735 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 NEURL4Q96JN8 1562 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 M0QYT0 321 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 GHRP10912 638 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 CNTN2Q02246 1040 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 CDH18Q13634 790 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 HIF1AQ16665 826 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 KCNT1Q5JUK3 1230 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 TDRD10Q5VZ19 366 aaKnown RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 SARM1Q6SZW1 724 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 C9orf72Q96LT7 481 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 RIT2Q99578 217 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 KLF6Q99612 283 aaPredicted RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 CBWD1Q9BRT8 395 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 GPATCH2LQ9NWQ4 482 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 XPO7Q9UIA9 1087 aaKnown RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 DIS3Q9Y2L1 958 aaKnown RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 ITIH6Q6UXX5 1313 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 ZNF541Q9H0D2 1346 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 UBR1Q8IWV7 1749 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 C3orf70A6NLC5 250 aaPredicted RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 CYB561D2O14569 222 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 ASAP2O43150 1006 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 MAP4P27816 1152 aaKnown RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 PCSK1P29120 753 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 ZRANB3Q5FWF4 1079 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 TADA2BQ86TJ2 420 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 MFN1Q8IWA4 741 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 PURBQ96QR8 312 aaKnown RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 PPP1R9AQ9ULJ8 1098 aa10.21□□□□□ -0.77
SNX13-203ENST00000428135 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.21□□□□□ -0.77
SNX13-203ENST00000428135 PMPCBO75439 489 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 MBL2P11226 248 aaPredicted RBP10.21□□□□□ -0.78
SNX13-203ENST00000428135 CYP2C19P33261 490 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 PEX19P40855 299 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 TROAPQ12815 778 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 ACAD11Q709F0 780 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 CARNMT1Q8N4J0 409 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 SLC26A7Q8TE54 656 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 SLITRK1Q96PX8 696 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 CAMKK2Q96RR4 588 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 LRRC1Q9BTT6 524 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 TRIM55Q9BYV6 548 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 DDIT4Q9NX09 232 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 MARCOQ9UEW3 520 aaPredicted RBP10.21□□□□□ -0.78
SNX13-203ENST00000428135 A0A087WUV0 522 aaPredicted RBP10.21□□□□□ -0.78
SNX13-203ENST00000428135 KPNA7A9QM74 516 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 IL18RAPO95256 599 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 CKMP06732 381 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 PBLDP30039 288 aaPredicted RBP10.21□□□□□ -0.78
SNX13-203ENST00000428135 CDC42EP1Q00587 391 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 LZICQ8WZA0 190 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 GPR63Q9BZJ6 419 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 SNTG2Q9NY99 539 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 SENP1Q9P0U3 644 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 CHMP2BQ9UQN3 213 aa10.21□□□□□ -0.78
SNX13-203ENST00000428135 TBKBP1A7MCY6 615 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 SLC16A3O15427 465 aaKnown RBP10.2□□□□□ -0.78
SNX13-203ENST00000428135 MGEA5O60502 916 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 RHOBTB3O94955 611 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 ADORA2AP29274 412 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 KLHL38Q2WGJ6 581 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 TMC7Q7Z402 723 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 TRIM54Q9BYV2 358 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 SCAMP3O14828 347 aaKnown RBP10.2□□□□□ -0.78
SNX13-203ENST00000428135 IRF6O14896 467 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 TBX3O15119 743 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 GPR182O15218 404 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 MAPK13O15264 365 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 NDUFS3O75489 264 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 PLEKP08567 350 aaPredicted RBP10.2□□□□□ -0.78
SNX13-203ENST00000428135 SUPT20HL2P0C7V6 817 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 ODC1P11926 461 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 MYL4P12829 197 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 IGFBP4P22692 258 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 PPP4CP60510 307 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 ANKRD20A4Q4UJ75 823 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 ANKRD20A8PQ5CZ79 823 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 ANKRD20A2Q5SQ80 823 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 ANKRD20A1Q5TYW2 823 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 ALS2CLQ60I27 953 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 SDE2Q6IQ49 451 aa10.2□□□□□ -0.78
SNX13-203ENST00000428135 HIBCHQ6NVY1 386 aaPredicted RBP10.2□□□□□ -0.78
SNX13-203ENST00000428135 BPIFA3Q9BQP9 254 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms