RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 VNN2O95498 520 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 CHRM1P11229 460 aaPredicted RBP10.11□□□□□ -0.79
LSG1-202ENST00000427461 MCM5P33992 734 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 QARSP47897 775 aaKnown RBP10.11□□□□□ -0.79
LSG1-202ENST00000427461 MCM2P49736 904 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 CYP4F8P98187 520 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 KCNC4Q03721 635 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 HNRNPDQ14103 355 aaKnown RBP10.11□□□□□ -0.79
LSG1-202ENST00000427461 MRPL58Q14197 206 aaKnown RBP10.11□□□□□ -0.79
LSG1-202ENST00000427461 PTPAQ15257 358 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 CTXN3Q4LDR2 81 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 TPGS2Q68CL5 300 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 TMPRSS7Q7RTY8 843 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 NOSTRINQ8IVI9 506 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 DEFB119Q8N690 84 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 CNOT6LQ96LI5 555 aaKnown RBP10.11□□□□□ -0.79
LSG1-202ENST00000427461 MTRQ99707 1265 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 MTA3Q9BTC8 594 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 ZMYND12Q9H0C1 365 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 OSBPL3Q9H4L5 887 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 OBP2AQ9NY56 170 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 AFF4Q9UHB7 1163 aaKnown RBP10.11□□□□□ -0.79
LSG1-202ENST00000427461 GDAQ9Y2T3 454 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 STK24Q9Y6E0 443 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 USP9XQ93008 2570 aaPredicted RBP10.11□□□□□ -0.79
LSG1-202ENST00000427461 SPTA1P02549 2419 aa10.11□□□□□ -0.79
LSG1-202ENST00000427461 FAM149AA5PLN7 773 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 MAP3K13O43283 966 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 TRAPPC3O43617 180 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 TDP2O95551 362 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 HNRNPLP14866 589 aaKnown RBP eCLIP10.1□□□□□ -0.79
LSG1-202ENST00000427461 GABRR2P28476 465 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 GFPT1Q06210 699 aaPredicted RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 SOX4Q06945 474 aaPredicted RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 TFDP1Q14186 410 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 MXD4Q14582 209 aaPredicted RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 RTN1Q16799 776 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 PFKFB3Q16875 520 aaPredicted RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 FBXO43Q4G163 708 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 XKR9Q5GH70 373 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 PEAR1Q5VY43 1037 aaPredicted RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 LYSMD4Q5XG99 296 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 LSM14AQ8ND56 463 aaKnown RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 OLIG1Q8TAK6 271 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 RIN3Q8TB24 985 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 ACDQ96AP0 544 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 FCRL3Q96P31 734 aaPredicted RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 PGLYRP2Q96PD5 576 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 PPP1R10Q96QC0 940 aaKnown RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 P2RY13Q9BPV8 354 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 CAPN10Q9HC96 672 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 C6orf50Q9HD87 102 aa10.1□□□□□ -0.79
LSG1-202ENST00000427461 RBM28Q9NW13 759 aaKnown RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 THG1LQ9NWX6 298 aaKnown RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 APOBEC2Q9Y235 224 aaKnown RBP10.1□□□□□ -0.79
LSG1-202ENST00000427461 MGAQ8IWI9 3026 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 GOLGA4Q13439 2230 aaKnown RBP10.09□□□□□ -0.79
LSG1-202ENST00000427461 ESYT2A0FGR8 921 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 CAPN9O14815 690 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 GJB3O75712 270 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 SOAT2O75908 522 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 OR4Q2P0C623 313 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 CPB1P15086 417 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 GLRA2P23416 452 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 CDC27P30260 824 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 YWHABP31946 246 aaKnown RBP10.09□□□□□ -0.79
LSG1-202ENST00000427461 GJA4P35212 333 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 P2RY2P41231 377 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 SEC13P55735 322 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 DUOXA1Q1HG43 343 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 C2orf27AQ580R0 203 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 APOA5Q6Q788 366 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 TMEM92Q6UXU6 159 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 NAXDQ8IW45 347 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 EXOC8Q8IYI6 725 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 CCDC33Q8N5R6 958 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 FAM181AQ8N9Y4 354 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 PDZD7Q9H5P4 517 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 DNAAF2Q9NVR5 837 aaKnown RBP10.09□□□□□ -0.79
LSG1-202ENST00000427461 BRPF3Q9ULD4 1205 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 TPCN1Q9ULQ1 816 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 CCL26Q9Y258 94 aa10.09□□□□□ -0.79
LSG1-202ENST00000427461 COL5A1P20908 1838 aaPredicted RBP10.08□□□□□ -0.8
LSG1-202ENST00000427461 H7C4K7 107 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 ARHGAP33O14559 1287 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 SERPINF2P08697 491 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 ARL2P36404 184 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 EIF2S3P41091 472 aaKnown RBP10.08□□□□□ -0.8
LSG1-202ENST00000427461 USP11P51784 963 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 POU5F1BQ06416 359 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 DUSP4Q13115 394 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 NBR1Q14596 966 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 Q4G0T1 1027 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 EEF1DP3Q658K8 133 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 SYNE3Q6ZMZ3 975 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 DNAJB7Q7Z6W7 309 aaPredicted RBP10.08□□□□□ -0.8
LSG1-202ENST00000427461 SGMS1Q86VZ5 419 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 SPRYD3Q8NCJ5 442 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms