RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 ZCCHC18P0CG32 403 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 CCND1P24385 295 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 HSD17B4P51659 736 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 PSMD7P51665 324 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 KCNK10P57789 538 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 SLC10A4Q96EP9 437 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 AGPAT1Q99943 283 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 LCMT1Q9UIC8 334 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 MLNP12872 115 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 TARSP26639 723 aaKnown RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 FLT3P36888 993 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 RPS7P62081 194 aaKnown RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 LAMC2Q13753 1193 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 TBC1D19Q8N5T2 526 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 FOPNLQ96NB1 174 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 PARVBQ9HBI1 364 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 BATF3Q9NR55 127 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 MPP6Q9NZW5 540 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 SPASTQ9UBP0 616 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 NEU2Q9Y3R4 380 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 EIF3HO15372 352 aaKnown RBP eCLIP13.12□□□□□ -0.311e-6■■■■□ 24.6
HDLBP-214ENST00000427183 CAPN1P07384 714 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 IRF1P10914 325 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 MZF1P28698 734 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 NUP62P37198 522 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 ZNF200P98182 395 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 USP17L10C9JJH3 530 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 APOA4P06727 396 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SEC24CP53992 1094 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SIK1P57059 783 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 BYSLQ13895 437 aaKnown RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 JADE3Q92613 823 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SMG5Q9UPR3 1016 aaKnown RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 CRB1P82279 1406 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 TMEM191CA6NGB0 347 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 GRAP2O75791 330 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 CDK17Q00537 523 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SHROOM1Q2M3G4 852 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 POTEAQ6S8J7 498 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 DHX40Q8IX18 779 aaKnown RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 KRT78Q8N1N4 520 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 HPS3Q969F9 1004 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 OPTNQ96CV9 577 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SMARCAD1Q9H4L7 1026 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SYBUQ9NX95 663 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 CHI3L2Q15782 390 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 AKIRIN2Q53H80 203 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 FAM182BQ5T319 152 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 CMTM5Q96DZ9 223 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SPRTNQ9H040 489 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 TRIM10Q9UDY6 481 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 ZBTB1Q9Y2K1 713 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 NEDD4P46934 1319 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 GGPS1O95749 300 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 WEE2P0C1S8 567 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 RALAP11233 206 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 GNAT1P11488 350 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SGF29Q96ES7 293 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 XPO6Q96QU8 1125 aaKnown RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 MXD3Q9BW11 206 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 PSMC3IPQ9P2W1 217 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 HERC5Q9UII4 1024 aaKnown RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 PGK2P07205 417 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 PTPN7P35236 360 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 IREB2P48200 963 aaKnown RBP13.11□□□□□ -0.31
HDLBP-214ENST00000427183 NUDT2P50583 147 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 NME5P56597 212 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 PGBD3Q8N328 593 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SLC35G2Q8TBE7 412 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 ECSITQ9BQ95 431 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 SLC40A1Q9NP59 571 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 DOLKQ9UPQ8 538 aa13.11□□□□□ -0.31
HDLBP-214ENST00000427183 FAM47DPA6NHR8 397 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 AP3B1O00203 1094 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 KLHL2O95198 593 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-214ENST00000427183 TRIM32Q13049 653 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 F8W810 466 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 USP39Q53GS9 565 aaKnown RBP13.1□□□□□ -0.31
HDLBP-214ENST00000427183 SNRNP48Q6IEG0 339 aaKnown RBP13.1□□□□□ -0.31
HDLBP-214ENST00000427183 GPR141Q7Z602 305 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 HIC2Q96JB3 615 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 CALR3Q96L12 384 aaKnown RBP13.1□□□□□ -0.31
HDLBP-214ENST00000427183 THUMPD3Q9BV44 507 aaKnown RBP13.1□□□□□ -0.31
HDLBP-214ENST00000427183 MRPL4Q9BYD3 311 aaKnown RBP13.1□□□□□ -0.31
HDLBP-214ENST00000427183 SLC30A1Q9Y6M5 507 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 PIPSLA2A3N6 862 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 OVGP1Q12889 678 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 CDC16Q13042 620 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 PTRHD1Q6GMV3 140 aaKnown RBP13.1□□□□□ -0.31
HDLBP-214ENST00000427183 C3orf62Q6ZUJ4 267 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 GPD1LQ8N335 351 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 KRT84Q9NSB2 600 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 TMEM120BA0PK00 339 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 ZBTB5O15062 677 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 HSMCR30P0CW71 290 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms