RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CTAGE9A4FU28 777 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 AKR1B10O60218 316 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 RFX1P22670 979 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 PON1P27169 355 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 ARHGAP25P42331 645 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 CLCNKBP51801 687 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 POU5F1Q01860 360 aaKnown RBP16.78■□□□□ 0.28
SHOX2-202ENST00000425436 CYP24A1Q07973 514 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 TMEM132DQ14C87 1099 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 Q7L0L9 218 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 USP37Q86T82 979 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 TMEM173Q86WV6 379 aaPredicted RBP16.78■□□□□ 0.28
SHOX2-202ENST00000425436 CD302Q8IX05 232 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 EFCAB13Q8IY85 973 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 KLHL23Q8NBE8 558 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 PLEKHO2Q8TD55 490 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 MFSD14AQ96MC6 490 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 ZNF558Q96NG5 402 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 GANQ9H2C0 597 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 FAN1Q9Y2M0 1017 aa16.78■□□□□ 0.28
SHOX2-202ENST00000425436 PMM2O15305 246 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 DLATP10515 647 aaKnown RBP16.77■□□□□ 0.28
SHOX2-202ENST00000425436 VAV2P52735 878 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 TFAMQ00059 246 aaKnown RBP16.77■□□□□ 0.28
SHOX2-202ENST00000425436 BFSP1Q12934 665 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 GRIN2CQ14957 1233 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 ZNF569Q5MCW4 686 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 CCDC122Q5T0U0 273 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 ZNF697Q5TEC3 545 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 SCARA3Q6AZY7 606 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 FBXO22Q8NEZ5 403 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 SPAG5Q96R06 1193 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 WDR24Q96S15 920 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 CRACR2AQ9BSW2 395 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 ALG13Q9NP73 1137 aaKnown RBP16.77■□□□□ 0.28
SHOX2-202ENST00000425436 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 ARHGAP20Q9P2F6 1191 aa16.77■□□□□ 0.28
SHOX2-202ENST00000425436 REXO2Q9Y3B8 237 aaKnown RBP16.77■□□□□ 0.28
SHOX2-202ENST00000425436 PTPRJQ12913 1337 aa16.77■□□□□ 0.27
SHOX2-202ENST00000425436 CSPG5O95196 566 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 CCDC172P0C7W6 258 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 UCHL3P15374 230 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 EIF4A3P38919 411 aaKnown RBP16.76■□□□□ 0.27
SHOX2-202ENST00000425436 FMO5P49326 533 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 KIF11P52732 1056 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 DLG4P78352 724 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 PSMD6Q15008 389 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 ASIC2Q16515 512 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 C10orf76Q5T2E6 689 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 HASPINQ8TF76 798 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 BCL7CQ8WUZ0 217 aaPredicted RBP16.76■□□□□ 0.27
SHOX2-202ENST00000425436 JAKMIP2Q96AA8 810 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 TMEM175Q9BSA9 504 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 PRDM12Q9H4Q4 367 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 NLRC4Q9NPP4 1024 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 SPG21Q9NZD8 308 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 UBQLN1Q9UMX0 589 aaKnown RBP16.76■□□□□ 0.27
SHOX2-202ENST00000425436 RWDD3Q9Y3V2 267 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 PLXNA4Q9HCM2 1894 aa16.76■□□□□ 0.27
SHOX2-202ENST00000425436 C5orf67F2Z3F1 127 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 FGF18O76093 207 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 ITGB1P05556 798 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 TNNI1P19237 187 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 GPM6BQ13491 265 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 UPP1Q16831 310 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 SLC39A11Q8N1S5 342 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 MNS1Q8NEH6 495 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 OR5B17Q8NGF7 314 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 GDPD5Q8WTR4 605 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 ZNF516Q92618 1163 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 SAMD11Q96NU1 681 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 FNBP1Q96RU3 617 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 NAPGQ99747 312 aaPredicted RBP16.75■□□□□ 0.27
SHOX2-202ENST00000425436 MARCH5Q9NX47 278 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 DPP3Q9NY33 737 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 GCNT4Q9P109 453 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 DERAQ9Y315 318 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 C2CD2Q9Y426 696 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 PCDHA13Q9Y5I0 950 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 RB1P06400 928 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 SLC9A1P19634 815 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 VAMP7P51809 220 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 KLHL30Q0D2K2 578 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 SURF1Q15526 300 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 ASTE1Q2TB18 679 aaPredicted RBP16.75■□□□□ 0.27
SHOX2-202ENST00000425436 VPS36Q86VN1 386 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 C3orf58Q8NDZ4 430 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 BEST2Q8NFU1 509 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 PARD3BQ8TEW8 1205 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 IGSF21Q96ID5 467 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 COLEC11Q9BWP8 271 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 PLVAPQ9BX97 442 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 MTMR12Q9C0I1 747 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 GUCA1BQ9UMX6 200 aa16.75■□□□□ 0.27
SHOX2-202ENST00000425436 LRRIQ3A6PVS8 624 aaPredicted RBP16.74■□□□□ 0.27
SHOX2-202ENST00000425436 H3BNC9 293 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 PODXLO00592 558 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 PPEF2O14830 753 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 GRM6O15303 877 aa16.74■□□□□ 0.27
SHOX2-202ENST00000425436 XPOTO43592 962 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms