RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 MCOLN2Q8IZK6 566 aa11.35□□□□□ -0.59
CUX1-205ENST00000425244 ZBTB45Q96K62 511 aaPredicted RBP11.35□□□□□ -0.59
CUX1-205ENST00000425244 USTQ9Y2C2 406 aa11.35□□□□□ -0.59
CUX1-205ENST00000425244 EXTL3O43909 919 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 TRPA1O75762 1119 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 CFHP08603 1231 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 ZNF286BP0CG31 522 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 GBP1P32455 592 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 FNTAP49354 379 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 MAP2K5Q13163 448 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 ACVR2BQ13705 512 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 XKR3Q5GH77 459 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 SPDYCQ5MJ68 293 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 ZBTB41Q5SVQ8 909 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 TDRD10Q5VZ19 366 aaKnown RBP11.34□□□□□ -0.59
CUX1-205ENST00000425244 KCNV1Q6PIU1 500 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 AFG1LQ8WV93 481 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 TRAPPC12Q8WVT3 735 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 ZNF668Q96K58 619 aaPredicted RBP11.34□□□□□ -0.59
CUX1-205ENST00000425244 CABS1Q96KC9 395 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 XPO6Q96QU8 1125 aaKnown RBP11.34□□□□□ -0.59
CUX1-205ENST00000425244 DDX23Q9BUQ8 820 aaKnown RBP11.34□□□□□ -0.59
CUX1-205ENST00000425244 CNOT10Q9H9A5 744 aaKnown RBP11.34□□□□□ -0.59
CUX1-205ENST00000425244 AGO2Q9UKV8 859 aaKnown RBP11.34□□□□□ -0.59
CUX1-205ENST00000425244 PCDHB4Q9Y5E5 795 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 MAFBQ9Y5Q3 323 aaPredicted RBP11.34□□□□□ -0.59
CUX1-205ENST00000425244 PTPRJQ12913 1337 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 MROH7Q68CQ1 1323 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 ADGRA2Q96PE1 1338 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 SLC15A5A6NIM6 579 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 O00370 1275 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 RIPK2O43353 540 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 PSMC4P43686 418 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 NOGQ13253 232 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 SLMAPQ14BN4 828 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 CYP1B1Q16678 543 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 ZFYVE27Q5T4F4 411 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 FAM160B1Q5W0V3 765 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 TMEM270Q6UE05 265 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 CCDC121Q6ZUS5 278 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 ENOSF1Q7L5Y1 443 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 DEPTORQ8TB45 409 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 ART4Q93070 314 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 HERPUD2Q9BSE4 406 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 SLC5A4Q9NY91 659 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 ARHGAP28Q9P2N2 729 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 PCDHB2Q9Y5E7 798 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 LRRC37A2A6NM11 1700 aa11.34□□□□□ -0.59
CUX1-205ENST00000425244 GOLGA6L7A0A1B0GV03 622 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 RASGRF2O14827 1237 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 ADCY6O43306 1168 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 CA12O43570 354 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 ATG7O95352 703 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 GJB6O95452 261 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 CPP00450 1065 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 UNGP13051 313 aaPredicted RBP11.33□□□□□ -0.59
CUX1-205ENST00000425244 TM4SF4P48230 202 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 IFNAR2P48551 515 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 CACNA2D3Q8IZS8 1091 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 ASAP3Q8TDY4 903 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 SEC16BQ96JE7 1060 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 RUNDC3BQ96NL0 473 aa11.33□□□□□ -0.59
CUX1-205ENST00000425244 TARS2Q9BW92 718 aaKnown RBP11.33□□□□□ -0.59
CUX1-205ENST00000425244 RBAKQ9NYW8 714 aaPredicted RBP11.33□□□□□ -0.59
CUX1-205ENST00000425244 RARGP13631 454 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 SMPD1P17405 629 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 ADCY2Q08462 1091 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 LONRF1Q17RB8 773 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 MORN1Q5T089 497 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 GKAP1Q5VSY0 366 aaPredicted RBP11.33□□□□□ -0.6
CUX1-205ENST00000425244 SLC7A3Q8WY07 619 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 PGM2Q96G03 612 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 MSTO1Q9BUK6 570 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 ABHD16BQ9H3Z7 469 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 LRRC19Q9H756 370 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 VTA1Q9NP79 307 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 KLHL11Q9NVR0 708 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 R3HDM2Q9Y2K5 976 aaKnown RBP11.33□□□□□ -0.6
CUX1-205ENST00000425244 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.33□□□□□ -0.6
CUX1-205ENST00000425244 SRRM3A6NNA2 597 aaPredicted RBP11.33□□□□□ -0.6
CUX1-205ENST00000425244 K7ERI5 159 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 FSCN2O14926 492 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 DYNC1LI2O43237 492 aaPredicted RBP11.33□□□□□ -0.6
CUX1-205ENST00000425244 RALAP11233 206 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 CHKAP35790 457 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 ADCY8P40145 1251 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 ARHGAP1Q07960 439 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 PSMD6Q15008 389 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 ZACNQ401N2 412 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 C6orf118Q5T5N4 469 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 MMS22LQ6ZRQ5 1243 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 LRRC71Q8N4P6 559 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 MGARPQ8TDB4 240 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 CHMP6Q96FZ7 201 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 PPP1R16BQ96T49 567 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 FAM129AQ9BZQ8 928 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 RNPEPQ9H4A4 650 aa11.33□□□□□ -0.6
CUX1-205ENST00000425244 ADAM22Q9P0K1 906 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms