RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CLCN1P35523 988 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 GNL1P36915 607 aaPredicted RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 EIF4A3P38919 411 aaKnown RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 CLCNKBP51801 687 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 GUCY2FP51841 1108 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 SOX4Q06945 474 aaPredicted RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 BMS1Q14692 1282 aaKnown RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 NAB2Q15742 525 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 TDRD12Q587J7 1177 aaKnown RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 CLLU1OSQ5K130 101 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 PPP1R2P3Q6NXS1 205 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 TMEM270Q6UE05 265 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 DSTYKQ6XUX3 929 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 ZSCAN30Q86W11 494 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 UNC93AQ86WB7 457 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 METTL23Q86XA0 190 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 TMEM139Q8IV31 216 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 C7orf61Q8IZ16 206 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 TMEM86AQ8N2M4 240 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 SPATA18Q8TC71 538 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 BADQ92934 168 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 FAM84AQ96KN4 292 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 CASD1Q96PB1 797 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 EIF3CQ99613 913 aaKnown RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 AGPAT1Q99943 283 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 TMEM175Q9BSA9 504 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.04□□□□□ -0.64
MDC1-205ENST00000425072 GPR88Q9GZN0 384 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 MTIF3Q9H2K0 278 aaKnown RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 SNX25Q9H3E2 840 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 RNF19AQ9NV58 838 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 TBC1D13Q9NVG8 400 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 ARHGAP20Q9P2F6 1191 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 DSEQ9UL01 958 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 BARX2Q9UMQ3 279 aaPredicted RBP11.04□□□□□ -0.64
MDC1-205ENST00000425072 FAN1Q9Y2M0 1017 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 SCN1AP35498 2009 aa11.04□□□□□ -0.64
MDC1-205ENST00000425072 TBKBP1A7MCY6 615 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 MED7O43513 233 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 TADA2AO75478 443 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 DGKIO75912 1065 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 NDUFA10O95299 355 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 CCDC175P0C221 793 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 ACRP10323 421 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 FGFR1P11362 822 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 CYP11B1P15538 503 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 LHX1P48742 406 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 ALDH7A1P49419 539 aaKnown RBP11.03□□□□□ -0.64
MDC1-205ENST00000425072 PDE6CP51160 858 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 AFF1P51825 1210 aaKnown RBP11.03□□□□□ -0.64
MDC1-205ENST00000425072 DSC1Q08554 894 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 STILQ15468 1287 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 HGSNATQ68CP4 663 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 PSRC1Q6PGN9 363 aaPredicted RBP11.03□□□□□ -0.64
MDC1-205ENST00000425072 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.03□□□□□ -0.64
MDC1-205ENST00000425072 COLGALT2Q8IYK4 626 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 PHOSPHO2Q8TCD6 241 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 KAT5Q92993 513 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 TMEM176AQ96HP8 235 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 SENP8Q96LD8 212 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 NT5C1AQ9BXI3 368 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 PDCL3Q9H2J4 239 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 KCNF1Q9H3M0 494 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 ADAMTS1Q9UHI8 967 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 TANC1Q9C0D5 1861 aa11.03□□□□□ -0.64
MDC1-205ENST00000425072 GOLGA6L9A6NEM1 432 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 CASTOR2A6NHX0 329 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 TMEM189-UBE2V1I3L0A0 370 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 DDHD2O94830 711 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 LCA5LO95447 670 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 VDRP11473 427 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 GZMAP12544 262 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 CD58P19256 250 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 MAGEA1P43355 309 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 ASPAP45381 313 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 OR1G1P47890 313 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 CDH8P55286 799 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 CDR2Q01850 454 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 INCA1Q0VD86 236 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 ELAVL2Q12926 359 aaKnown RBP11.02□□□□□ -0.65
MDC1-205ENST00000425072 SLC18A3Q16572 532 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 TCTN1Q2MV58 587 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 SCARA3Q6AZY7 606 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 TRIM72Q6ZMU5 477 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 ZNF365Q70YC5 407 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 LIMS2Q7Z4I7 341 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 THEM5Q8N1Q8 247 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 UBR7Q8N806 425 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 RBBP8NLQ8NC74 664 aaPredicted RBP11.02□□□□□ -0.65
MDC1-205ENST00000425072 OR6B3Q8NGW1 331 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 KIAA1524Q8TCG1 905 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 VWCEQ96DN2 955 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 TNIP3Q96KP6 325 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 HEXIM2Q96MH2 286 aaKnown RBP11.02□□□□□ -0.65
MDC1-205ENST00000425072 NRDE2Q9H7Z3 1164 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 GOLGA2P5Q9HBQ8 144 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 KCND1Q9NSA2 647 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 AJAP1Q9UKB5 411 aaPredicted RBP11.02□□□□□ -0.65
MDC1-205ENST00000425072 POLIQ9UNA4 740 aa11.02□□□□□ -0.65
MDC1-205ENST00000425072 MICAL3Q7RTP6 2002 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms