RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 LIMS2Q7Z4I7 341 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 PROSER1Q86XN7 944 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 KBTBD2Q8IY47 623 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 DTX3Q8N9I9 347 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 TRIML1Q8N9V2 468 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 TOR1AIP2Q8NFQ8 470 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.13□□□□□ -1.758e-13■■□□□ 11.5
SF3B1-205ENST00000424674 RUFY2Q8WXA3 655 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 CLEC4DQ8WXI8 215 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 JAKMIP2Q96AA8 810 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 CNDP2Q96KP4 475 aaKnown RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ACAP3Q96P50 834 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 CNPPD1Q9BV87 410 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 COLEC11Q9BWP8 271 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 CELF4Q9BZC1 486 aaKnown RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 EDEM3Q9BZQ6 932 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 TRIM6Q9C030 488 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ARHGAP39Q9C0H5 1083 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 C2orf40Q9H1Z8 148 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 TMPRSS5Q9H3S3 457 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 GRPEL1Q9HAV7 217 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 TRPV4Q9HBA0 871 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 BARX1Q9HBU1 254 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 PNPLA8Q9NP80 782 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 KRT84Q9NSB2 600 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 HAUS2Q9NVX0 235 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 PPP4R1LQ9P1A2 415 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 CEP72Q9P209 647 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 LRFN1Q9P244 771 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ST6GALNAC2Q9UJ37 374 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 BLOC1S6Q9UL45 172 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 SMC3Q9UQE7 1217 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 NOC2LQ9Y3T9 749 aaKnown RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 SYNJ2BP-COX16A0A087WUM0 186 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 PTPDC1A2A3K4 754 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 PI4KAP2A4QPH2 592 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 POM121BA6NF01 834 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 PI4K2BG5E9Z4 385 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 ARVCFO00192 962 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 IPO5O00410 1097 aaKnown RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 SYT5O00445 386 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 FYB1O15117 783 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 URI1O94763 535 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 FSBPO95073 299 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 SGPL1O95470 568 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 CKMT1AP12532 417 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 KRT10P13645 584 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 RPS2P15880 293 aaKnown RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 TSHRP16473 764 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 FAHP16930 419 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 KRT15P19012 456 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 TNFRSF1AP19438 455 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 PDCP20941 246 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 AGXTP21549 392 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 C5AR1P21730 350 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 CHMP24386 653 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 HNF4AP41235 474 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 EPHB4P54760 987 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 HSD17B7P56937 341 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 KIF23Q02241 960 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 NFATC3Q12968 1075 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 MAPK7Q13164 816 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 EFR3AQ14156 821 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 BECN1Q14457 450 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 SF3B3Q15393 1217 aaKnown RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 SMAD2Q15796 467 aaKnown RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 PFKFB4Q16877 469 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 ARHGAP44Q17R89 818 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 UAP1L1Q3KQV9 507 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 ADCK5Q3MIX3 580 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 PAN2Q504Q3 1202 aaKnown RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 FAM47CQ5HY64 1035 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 HABP4Q5JVS0 413 aaKnown RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 CD276Q5ZPR3 534 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 TRIM68Q6AZZ1 485 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 TATDN1Q6P1N9 297 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 MFSD6Q6ZSS7 791 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 OTUD6AQ7L8S5 288 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 EPHX4Q8IUS5 362 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 RPAP2Q8IXW5 612 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 SIMC1Q8NDZ2 872 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 TDRD7Q8NHU6 1098 aaKnown RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 IGDCC4Q8TDY8 1250 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 DVL3Q92997 716 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 CEP95Q96GE4 821 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 APIPQ96GX9 242 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 EYA3Q99504 573 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 STK33Q9BYT3 514 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 CD244Q9BZW8 370 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 UNKQ9C0B0 810 aaKnown RBP4.12□□□□□ -1.75
SF3B1-205ENST00000424674 GHITMQ9H3K2 345 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 PREBQ9HCU5 417 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 OXSMQ9NWU1 459 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 HPF1Q9NWY4 346 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 DNAJC28Q9NX36 388 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 TBC1D29Q9UFV1 150 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 RASAL2Q9UJF2 1139 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 ZNF711Q9Y462 761 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 MTF2Q9Y483 593 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms