RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 C4orf22Q6V702 233 aa14.48□□□□□ -0.09
SREBF2-202ENST00000424354 PRPF39Q86UA1 669 aaKnown RBP14.48□□□□□ -0.09
SREBF2-202ENST00000424354 LRRC34Q8IZ02 419 aa14.48□□□□□ -0.09
SREBF2-202ENST00000424354 OR6P1Q8NGX9 317 aa14.48□□□□□ -0.09
SREBF2-202ENST00000424354 IGDCC4Q8TDY8 1250 aa14.48□□□□□ -0.09
SREBF2-202ENST00000424354 SCFD1Q8WVM8 642 aa14.48□□□□□ -0.09
SREBF2-202ENST00000424354 CARD9Q9H257 536 aa14.48□□□□□ -0.09
SREBF2-202ENST00000424354 NEUROG2Q9H2A3 272 aa14.48□□□□□ -0.09
SREBF2-202ENST00000424354 PABPC3Q9H361 631 aaKnown RBP14.48□□□□□ -0.09
SREBF2-202ENST00000424354 GABBR1Q9UBS5 961 aa14.48□□□□□ -0.09
SREBF2-202ENST00000424354 GRID1Q9ULK0 1009 aa14.48□□□□□ -0.09
SREBF2-202ENST00000424354 WDR47O94967 919 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 DDX5P17844 614 aaKnown RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 RPS12P25398 132 aaKnown RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 STILQ15468 1287 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 C18orf8Q96DM3 657 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 RMDN2Q96LZ7 410 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 TRIM54Q9BYV2 358 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 FRMD8Q9BZ67 464 aaPredicted RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 GPBP1L1Q9HC44 474 aaPredicted RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 HSPBP1Q9NZL4 362 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 RNF181Q9P0P0 153 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 PAK5Q9P286 719 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 MAD2L2Q9UI95 211 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 SUGT1Q9Y2Z0 365 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 TBX3O15119 743 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 WEE2P0C1S8 567 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 STK4Q13043 487 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 MXD4Q14582 209 aaPredicted RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 AASDHQ4L235 1098 aaPredicted RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 E2F7Q96AV8 911 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 L1RE1Q9UN81 338 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 MYL2P10916 166 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 NMT1P30419 496 aaKnown RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 SCTRP47872 440 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 TSPY1Q01534 308 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 SLC44A4Q53GD3 710 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 CLEC4FQ8N1N0 589 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 SLC44A5Q8NCS7 719 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 CYGBQ8WWM9 190 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 SP110Q9HB58 689 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 POLD4Q9HCU8 107 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 PCMTD2Q9NV79 361 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 F5H423 210 aaPredicted RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 KRT75O95678 551 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 COMTP21964 271 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 COILP38432 576 aaPredicted RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 CRKP46108 304 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 KRT72Q14CN4 511 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 RAB6BQ9NRW1 208 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 MARCOQ9UEW3 520 aaPredicted RBP14.47□□□□□ -0.09
SREBF2-202ENST00000424354 TSC22D4Q9Y3Q8 395 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 LRRC37A3O60309 1634 aa14.47□□□□□ -0.09
SREBF2-202ENST00000424354 NEMP1O14524 444 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 P4HA2O15460 535 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 SESN2P58004 480 aaPredicted RBP14.46□□□□□ -0.09
SREBF2-202ENST00000424354 RABL6Q3YEC7 729 aaPredicted RBP14.46□□□□□ -0.09
SREBF2-202ENST00000424354 KCTD17Q8N5Z5 321 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 CASKIN2Q8WXE0 1202 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 MKNK1Q9BUB5 465 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 IL25Q9H293 177 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 TMBIM4Q9HC24 238 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 APRTP07741 180 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 EFNA5P52803 228 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 GEMIN4P57678 1058 aaKnown RBP14.46□□□□□ -0.09
SREBF2-202ENST00000424354 FOXO4P98177 505 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 DDX42Q86XP3 938 aaKnown RBP eCLIP14.46□□□□□ -0.09
SREBF2-202ENST00000424354 ASAP3Q8TDY4 903 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 HPS3Q969F9 1004 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 DNAJC7Q99615 494 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 TMEM117Q9H0C3 514 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 FAM217BQ9NTX9 383 aaPredicted RBP14.46□□□□□ -0.09
SREBF2-202ENST00000424354 PPP1R3GB7ZBB8 358 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 ATP9BO43861 1147 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 SPRP35270 261 aaPredicted RBP14.46□□□□□ -0.09
SREBF2-202ENST00000424354 MAGEB18Q96M61 343 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 C20orf96Q9NUD7 363 aaPredicted RBP14.46□□□□□ -0.09
SREBF2-202ENST00000424354 LMCD1Q9NZU5 365 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 PCDHGB4Q9UN71 923 aa14.46□□□□□ -0.09
SREBF2-202ENST00000424354 KLRC1P26715 233 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 SERPINB1P30740 379 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 ERFP50548 548 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 PDIA6Q15084 440 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 C3orf62Q6ZUJ4 267 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 CLMNQ96JQ2 1002 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 ZBED2Q9BTP6 218 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 CELF4Q9BZC1 486 aaKnown RBP14.46□□□□□ -0.1
SREBF2-202ENST00000424354 SARS2Q9NP81 518 aaKnown RBP14.46□□□□□ -0.1
SREBF2-202ENST00000424354 ALG6Q9Y672 507 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 A0A1B0GW55 424 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 M0R3G1 203 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 AIM2O14862 343 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 DUX4L2P0CJ85 424 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 DUX4L3P0CJ86 424 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 DUX4L4P0CJ87 422 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 DUX4L5P0CJ88 424 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 DUX4L6P0CJ89 424 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 DUX4L7P0CJ90 424 aa14.46□□□□□ -0.1
SREBF2-202ENST00000424354 SNRPFP62306 86 aaKnown RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms