RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 CYP11A1P05108 521 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 CTSAP10619 480 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 TYMPP19971 482 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 GLUD2P49448 558 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 DSG1Q02413 1049 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 WDR72Q3MJ13 1102 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 ZNF667Q5HYK9 610 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 SPOPLQ6IQ16 392 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 LIMS2Q7Z4I7 341 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 CCDC150Q8NCX0 1101 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 GAS2L1Q99501 681 aaPredicted RBP18.24■□□□□ 0.51
COL7A1-202ENST00000422991 TTPALQ9BTX7 342 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 INTS2Q9H0H0 1204 aaKnown RBP18.24■□□□□ 0.51
COL7A1-202ENST00000422991 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL7A1-202ENST00000422991 L1RE1Q9UN81 338 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 POLIQ9UNA4 740 aa18.24■□□□□ 0.51
COL7A1-202ENST00000422991 A0A0C4DFX4 3053 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 PRUNE2Q8WUY3 3088 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 HUS1O60921 280 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 CLSTN1O94985 981 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 URODP06132 367 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 ERVFC1P60507 584 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 TNNC1P63316 161 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 PTPN14Q15678 1187 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 KIAA0319Q5VV43 1072 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 GBP6Q6ZN66 633 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 GPR65Q8IYL9 337 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 TOP6BLQ8N6T0 577 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 APPL2Q8NEU8 664 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 TCF25Q9BQ70 676 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 CRACR2AQ9BSW2 395 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 NIF3L1Q9GZT8 377 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 RBSNQ9H1K0 784 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 ENTPD7Q9NQZ7 604 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 NXF1Q9UBU9 619 aaKnown RBP18.23■□□□□ 0.51
COL7A1-202ENST00000422991 UNC80Q8N2C7 3258 aa18.23■□□□□ 0.51
COL7A1-202ENST00000422991 P4HA1P13674 534 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 ASPAP45381 313 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 FANCCQ00597 558 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 EXOC3L4Q17RC7 722 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 SOWAHAQ2M3V2 549 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 WDR44Q5JSH3 913 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 VARS2Q5ST30 1063 aaKnown RBP18.22■□□□□ 0.51
COL7A1-202ENST00000422991 WSCD1Q658N2 575 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 TRIM65Q6PJ69 517 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 SCARA5Q6ZMJ2 495 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 TMC7Q7Z402 723 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 CEP57Q86XR8 500 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 PDCL2Q8N4E4 241 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 EHBP1Q8NDI1 1231 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 AUTS2Q8WXX7 1259 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 RIN2Q8WYP3 895 aaPredicted RBP18.22■□□□□ 0.51
COL7A1-202ENST00000422991 PIK3R5Q8WYR1 880 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 MRPL38Q96DV4 380 aaKnown RBP18.22■□□□□ 0.51
COL7A1-202ENST00000422991 BCO2Q9BYV7 579 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 SMYD3Q9H7B4 428 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 DSEQ9UL01 958 aa18.22■□□□□ 0.51
COL7A1-202ENST00000422991 TIMM13Q9Y5L4 95 aaPredicted RBP18.22■□□□□ 0.51
COL7A1-202ENST00000422991 A0A1B0GTH6 734 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 LILRB3O75022 631 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 CSPG5O95196 566 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 SERPINC1P01008 464 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 IRS1P35568 1242 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 MRPL58Q14197 206 aaKnown RBP18.21■□□□□ 0.51
COL7A1-202ENST00000422991 SMC1AQ14683 1233 aaKnown RBP18.21■□□□□ 0.51
COL7A1-202ENST00000422991 PTPROQ16827 1216 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 FKBP15Q5T1M5 1219 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 PLPP4Q5VZY2 271 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 PDE12Q6L8Q7 609 aaKnown RBP18.21■□□□□ 0.51
COL7A1-202ENST00000422991 KIAA1841Q6NSI8 718 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 PDXDC1Q6P996 788 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 PRSS55Q6UWB4 352 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-202ENST00000422991 DPH6Q7L8W6 267 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 ADGRF2Q8IZF7 708 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 TMEM86AQ8N2M4 240 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 SPATA18Q8TC71 538 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 KBTBD7Q8WVZ9 684 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 TATDN2Q93075 761 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 FAXDC2Q96IV6 333 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 NT5C1BQ96P26 610 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 MMS19Q96T76 1030 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.51
COL7A1-202ENST00000422991 RTN4Q9NQC3 1192 aaKnown RBP18.21■□□□□ 0.51
COL7A1-202ENST00000422991 MRPL17Q9NRX2 175 aaKnown RBP18.21■□□□□ 0.51
COL7A1-202ENST00000422991 PCDHGC5Q9Y5F6 944 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 IRAK3Q9Y616 596 aa18.21■□□□□ 0.51
COL7A1-202ENST00000422991 MYO7AQ13402 2215 aa18.21■□□□□ 0.5
COL7A1-202ENST00000422991 C2CD2LO14523 706 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 TACC1O75410 805 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 OAZ2O95190 189 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 SLC9A1P19634 815 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 PON1P27169 355 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 UBXN1Q04323 297 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 YWHAHQ04917 246 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-202ENST00000422991 KCNMA1Q12791 1236 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 LRMPQ12912 555 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 BMS1Q14692 1282 aaKnown RBP18.2■□□□□ 0.5
COL7A1-202ENST00000422991 PSMD5Q16401 504 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 FILIP1LQ4L180 1135 aa18.2■□□□□ 0.5
COL7A1-202ENST00000422991 OVOS1Q6IE37 1185 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms