RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SLC17A8Q8NDX2 589 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 SMAD5Q99717 465 aaKnown RBP5.28□□□□□ -1.56
LINC00397-201ENST00000422074 IMPG2Q9BZV3 1241 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 WDCPQ9H6R7 721 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 SEMA4GQ9NTN9 838 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 LRIT1Q9P2V4 623 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 TLK1Q9UKI8 766 aa5.28□□□□□ -1.56
LINC00397-201ENST00000422074 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.28□□□□□ -1.56
LINC00397-201ENST00000422074 IBSPP21815 317 aaPredicted RBP5.27□□□□□ -1.57
LINC00397-201ENST00000422074 NHLH1Q02575 133 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 FPGSQ05932 587 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 NOGQ13253 232 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 KIF22Q14807 665 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 PTPRRQ15256 657 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 NBPF8Q3BBV2 869 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 FBXO42Q6P3S6 717 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 ADGRG5Q8IZF4 528 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 ACTRT2Q8TDY3 377 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 NELL1Q92832 810 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 LRFN3Q9BTN0 628 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 DUSP26Q9BV47 211 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 BRD9Q9H8M2 597 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 ETAA1Q9NY74 926 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 CFAP97Q9P2B7 532 aa5.27□□□□□ -1.57
LINC00397-201ENST00000422074 SETD1BQ9UPS6 1966 aaKnown RBP5.27□□□□□ -1.57
LINC00397-201ENST00000422074 WDR27A2RRH5 827 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 CCDC151A5D8V7 595 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 LRRC14BA6NHZ5 514 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 MGST3O14880 152 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 YY2O15391 372 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 PEX1O43933 1283 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 DTNBO60941 627 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 C1QL1O75973 258 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 MATN4O95460 622 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 GJB1P08034 283 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 VCAM1P19320 739 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 SMARCA1P28370 1054 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 NEK2P51955 445 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 HABP2Q14520 560 aaPredicted RBP5.26□□□□□ -1.57
LINC00397-201ENST00000422074 CD300EQ496F6 205 aaPredicted RBP5.26□□□□□ -1.57
LINC00397-201ENST00000422074 LPIN2Q92539 896 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 TMEM125Q96AQ2 219 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 HSPBAP1Q96EW2 488 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 PGBD1Q96JS3 809 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 FAM167AQ96KS9 214 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 MRPL46Q9H2W6 279 aaKnown RBP5.26□□□□□ -1.57
LINC00397-201ENST00000422074 PTGFRNQ9P2B2 879 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 ZDHHC8Q9ULC8 765 aa5.26□□□□□ -1.57
LINC00397-201ENST00000422074 LUC7L2Q9Y383 392 aaKnown RBP5.26□□□□□ -1.57
LINC00397-201ENST00000422074 PROP1O75360 226 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 ABLIM3O94929 683 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 PIK3CGP48736 1102 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 PTH2RP49190 550 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 MC2RQ01718 297 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 CCDC142Q17RM4 750 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 TAPT1Q6NXT6 567 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 SYCE2Q6PIF2 218 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 RD3Q7Z3Z2 195 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 HEATR3Q7Z4Q2 680 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 PPP1R32Q7Z5V6 425 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 ZBTB46Q86UZ6 589 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 SLC30A5Q8TAD4 765 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 SNX19Q92543 992 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 VOPP1Q96AW1 172 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 RGMAQ96B86 450 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 TRIB1Q96RU8 372 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 OSBPL9Q96SU4 736 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 TIMP4Q99727 224 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 SMOQ99835 787 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 SLC17A6Q9P2U8 582 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.25□□□□□ -1.57
LINC00397-201ENST00000422074 PCDHA3Q9Y5H8 950 aa5.25□□□□□ -1.57
LINC00397-201ENST00000422074 ANKRD62A6NC57 917 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 SOAT2O75908 522 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 IGLV2-14P01704 120 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 GNAI3P08754 354 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 RARBP10826 455 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 TYRP14679 529 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 WT1P19544 449 aaPredicted RBP5.24□□□□□ -1.57
LINC00397-201ENST00000422074 MAP2K6P52564 334 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 GNAI1P63096 354 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 COLEC12Q5KU26 742 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 EMC10Q5UCC4 262 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 BOLLQ8N9W6 283 aaKnown RBP5.24□□□□□ -1.57
LINC00397-201ENST00000422074 NSUN7Q8NE18 718 aaKnown RBP5.24□□□□□ -1.57
LINC00397-201ENST00000422074 DDX17Q92841 729 aaKnown RBP5.24□□□□□ -1.57
LINC00397-201ENST00000422074 C1orf43Q9BWL3 253 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 GTPBP4Q9BZE4 634 aaKnown RBP5.24□□□□□ -1.57
LINC00397-201ENST00000422074 SIK2Q9H0K1 926 aa5.24□□□□□ -1.57
LINC00397-201ENST00000422074 POLRMTO00411 1230 aaKnown RBP5.23□□□□□ -1.57
LINC00397-201ENST00000422074 IL33O95760 270 aa5.23□□□□□ -1.57
LINC00397-201ENST00000422074 CD38P28907 300 aa5.23□□□□□ -1.57
LINC00397-201ENST00000422074 HNRNPMP52272 730 aaKnown RBP eCLIP5.23□□□□□ -1.57
LINC00397-201ENST00000422074 NXPH1P58417 271 aa5.23□□□□□ -1.57
LINC00397-201ENST00000422074 C21orf58P58505 322 aa5.23□□□□□ -1.57
LINC00397-201ENST00000422074 NKX6-1P78426 367 aaPredicted RBP5.23□□□□□ -1.57
LINC00397-201ENST00000422074 ITIH3Q06033 890 aa5.23□□□□□ -1.57
LINC00397-201ENST00000422074 PGS1Q32NB8 556 aa5.23□□□□□ -1.57
LINC00397-201ENST00000422074 ATAT1Q5SQI0 421 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms