RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 GPAT2Q6NUI2 795 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 NT5DC4Q86YG4 428 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 WDR49Q8IV35 697 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 PPTC7Q8NI37 304 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 CYP4F11Q9HBI6 524 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 PDE11AQ9HCR9 933 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 LRRC37A3O60309 1634 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 MT-ND3P03897 115 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 SARM1Q6SZW1 724 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 TBC1D19Q8N5T2 526 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 OR6P1Q8NGX9 317 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 DRC3Q9H069 523 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 NDFIP2Q9NV92 336 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 STRCQ7RTU9 1775 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 TRPM3Q9HCF6 1732 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 PKD1L3Q7Z443 1732 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 ARHGAP42A6NI28 874 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 F5H5T6 163 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 ARL4DP49703 201 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 P3H1Q32P28 736 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 FBXO47Q5MNV8 452 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 PPHLN1Q8NEY8 458 aaKnown RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 SLC30A5Q8TAD4 765 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 RAPGEF5Q92565 580 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 PKNOX2Q96KN3 472 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 RSAD1Q9HA92 442 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 SNTG2Q9NY99 539 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 CAPN11Q9UMQ6 739 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 MARF1Q9Y4F3 1742 aaKnown RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 BTBD19C9JJ37 291 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 PIK3CDO00329 1044 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 PARNO95453 639 aaKnown RBP11.29□□□□□ -0.6
PTCH1-206ENST00000421141 MAP4P27816 1152 aaKnown RBP11.29□□□□□ -0.6
PTCH1-206ENST00000421141 SLC12A1Q13621 1099 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 CDR2LQ86X02 465 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-206ENST00000421141 PABPC5Q96DU9 382 aaKnown RBP11.29□□□□□ -0.6
PTCH1-206ENST00000421141 GAS2L1Q99501 681 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-206ENST00000421141 CENPKQ9BS16 269 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 KLHL14Q9P2G3 628 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 MAP3K13O43283 966 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 TMED2Q15363 201 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 CSGALNACT1Q8TDX6 532 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 MYO10Q9HD67 2058 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 GUCY2CP25092 1073 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 PI4K2AQ9BTU6 479 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 PLA2G6O60733 806 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 UCHL3P15374 230 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 GPS1Q13098 491 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 ADSSL1Q8N142 457 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 MRPL17Q9NRX2 175 aaKnown RBP11.29□□□□□ -0.6
PTCH1-206ENST00000421141 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 UVRAGQ9P2Y5 699 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 KCNN4O15554 427 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 NOL3O60936 208 aaKnown RBP11.29□□□□□ -0.6
PTCH1-206ENST00000421141 SMIM10L2AP0DMW4 78 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 SMIM10L2BP0DMW5 78 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 CTNNB1P35222 781 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 EPHB4P54760 987 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 SH2D4BQ5SQS7 431 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 MAP3K21Q5TCX8 1036 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 OVOS1Q6IE37 1185 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 OTOP1Q7RTM1 612 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 WHAMMQ8TF30 809 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 SCFD1Q8WVM8 642 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 CDY2AQ9Y6F7 541 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 RTN3O95197 1032 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-206ENST00000421141 MCF2P10911 925 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 SYTL3Q4VX76 610 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 BFARQ9NZS9 450 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 PCDHAC2Q9Y5I4 1007 aa11.29□□□□□ -0.6
PTCH1-206ENST00000421141 TMEM247A6NEH6 219 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 MYL4P12829 197 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 FBXL16Q8N461 479 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 USP38Q8NB14 1042 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 UBA3Q8TBC4 463 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 ADAM2Q99965 735 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 ZNF212Q9UDV6 495 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 GRAP2O75791 330 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 STK4Q13043 487 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 UHMK1Q8TAS1 419 aaKnown RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 NUF2Q9BZD4 464 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 MAF1Q9H063 256 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 C3orf70A6NLC5 250 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 TRIM66O15016 1216 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 KRT37O76014 449 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 UBA1P22314 1058 aaKnown RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 EIF3EP60228 445 aaKnown RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 GRIK5Q16478 980 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 MEI1Q5TIA1 1274 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 ELOA2Q8IYF1 753 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 PDGFDQ9GZP0 370 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 PLA2G4CQ9UP65 541 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 UBA6A0AVT1 1052 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 DDX5P17844 614 aaKnown RBP11.28□□□□□ -0.6
PTCH1-206ENST00000421141 GPD1P21695 349 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 PSMD6Q15008 389 aa11.28□□□□□ -0.6
PTCH1-206ENST00000421141 RABGGTAQ92696 567 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms