RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SLC10A6Q3KNW5 377 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 GLRA4Q5JXX5 417 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 CST9Q5W186 159 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 DENND1BQ6P3S1 775 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 MCEEQ96PE7 176 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 PDZD7Q9H5P4 517 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 RPF1Q9H9Y2 349 aaKnown RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 FLRT1Q9NZU1 646 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 LRRC37A2A6NM11 1700 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 SMIM23A6NLE4 172 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 ANKRD65E5RJM6 399 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 HPDP32754 393 aaPredicted RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 PTGIRP43119 386 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 GTF2A2P52657 109 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 ACVR2BQ13705 512 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 MTHFD1LQ6UB35 978 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 MSL3Q8N5Y2 521 aaKnown RBP9.36□□□□□ -0.91
SNCA-206ENST00000420646 HAUS1Q96CS2 278 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 SH3GL2Q99962 352 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 LPIN3Q9BQK8 851 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 NIF3L1Q9GZT8 377 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 SLITRK6Q9H5Y7 841 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 MGAMO43451 1857 aa9.36□□□□□ -0.91
SNCA-206ENST00000420646 CCDC66A2RUB6 948 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 KIAA0391O15091 583 aaKnown RBP9.35□□□□□ -0.91
SNCA-206ENST00000420646 SHBGP04278 402 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 BPIFB4P59827 614 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 ZNF252P-AS1Q0IIN9 211 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 PPFIA1Q13136 1202 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 TFDP1Q14186 410 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 GRIK4Q16099 956 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 SGSM1Q2NKQ1 1148 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 DUPD1Q68J44 220 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 CCDC25Q86WR0 208 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 EMC1Q8N766 993 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 C12orf29Q8N999 325 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 OR6J1Q8NGC5 347 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 PPTC7Q8NI37 304 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 FAM76AQ8TAV0 307 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 TINF2Q9BSI4 451 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 APOL6Q9BWW8 343 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 C2orf40Q9H1Z8 148 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 SAE1Q9UBE0 346 aaPredicted RBP9.35□□□□□ -0.91
SNCA-206ENST00000420646 PPEF2O14830 753 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 HCRTO43612 131 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 PHF2O75151 1096 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 TNNC2P02585 160 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 TBXAS1P24557 533 aaPredicted RBP9.35□□□□□ -0.91
SNCA-206ENST00000420646 CTNNA2P26232 953 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 POLR2BP30876 1174 aaKnown RBP9.35□□□□□ -0.91
SNCA-206ENST00000420646 ABCD1P33897 745 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 ZNF132P52740 706 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 BEX3Q00994 111 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 CUL1Q13616 776 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 SMTNL2Q2TAL5 461 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 KCNT1Q5JUK3 1230 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 SPRYD7Q5W111 196 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 ZDHHC24Q6UX98 284 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 TMC3Q7Z5M5 1100 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 SHCBP1Q8NEM2 672 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 UBA3Q8TBC4 463 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 DDX27Q96GQ7 796 aaKnown RBP9.35□□□□□ -0.91
SNCA-206ENST00000420646 FMO2Q99518 471 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 MAF1Q9H063 256 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 C10orf88Q9H8K7 445 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 ZDHHC18Q9NUE0 388 aa9.35□□□□□ -0.91
SNCA-206ENST00000420646 A0A0C4DFX4 3053 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNCA-206ENST00000420646 PPFIA4O75335 1185 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 MMP8P22894 467 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 COILP38432 576 aaPredicted RBP9.34□□□□□ -0.91
SNCA-206ENST00000420646 HSPA9P38646 679 aaKnown RBP9.34□□□□□ -0.91
SNCA-206ENST00000420646 PHKA2P46019 1235 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 LACTBP83111 547 aaPredicted RBP9.34□□□□□ -0.91
SNCA-206ENST00000420646 PDCLQ13371 301 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 TCEAL1Q15170 157 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 RAB6CQ53S08 254 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 SGO2Q562F6 1265 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 ALS2CLQ60I27 953 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 UBR7Q8N806 425 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 ANKRD36BP1Q96IX9 119 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 OSMRQ99650 979 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 RAB6CQ9H0N0 254 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 GRHL1Q9NZI5 618 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 AGAP1Q9UPQ3 857 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 TNFSF13BQ9Y275 285 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 H0YGN5 161 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 ZEB2O60315 1214 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 MMP3P08254 477 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 CYP2B6P20813 491 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 SLC26A2P50443 739 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 HUNKP57058 714 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 GUCY1A3Q02108 690 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 DCUN1D2Q6PH85 259 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 B4GALNT4Q76KP1 1039 aa9.34□□□□□ -0.91
SNCA-206ENST00000420646 NAP1L3Q99457 506 aaPredicted RBP9.34□□□□□ -0.91
SNCA-206ENST00000420646 EIF2AQ9BY44 585 aaKnown RBP9.34□□□□□ -0.91
SNCA-206ENST00000420646 SEMA4AQ9H3S1 761 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms