RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 PRR5-ARHGAP8B1AHC4 643 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 SPECC1L-ADORA2AF8WAN1 911 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 FAM189A1O60320 539 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 TOM1L1O75674 476 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 OAZ2O95190 189 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 CTHP32929 405 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 AARSP49588 968 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC00339-203ENST00000420503 KPNA1P52294 538 aaPredicted RBP14.02□□□□□ -0.17
LINC00339-203ENST00000420503 ARHGAP8P85298 464 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 YWHAHQ04917 246 aaPredicted RBP14.02□□□□□ -0.17
LINC00339-203ENST00000420503 MCL1Q07820 350 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 GNL2Q13823 731 aaKnown RBP14.02□□□□□ -0.17
LINC00339-203ENST00000420503 PPM1JQ5JR12 505 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 NAIF1Q69YI7 327 aaPredicted RBP14.02□□□□□ -0.17
LINC00339-203ENST00000420503 CENPPQ6IPU0 288 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 RIN3Q8TB24 985 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 CHFRQ96EP1 664 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 DRC1Q96MC2 740 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 RTKNQ9BST9 563 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 FAM126AQ9BYI3 521 aaPredicted RBP14.02□□□□□ -0.17
LINC00339-203ENST00000420503 IKZF4Q9H2S9 585 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 TRPV5Q9NQA5 729 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 PPP4R2Q9NY27 417 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 LIMCH1Q9UPQ0 1083 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 CFAP47Q6ZTR5 3102 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 ZFHX4Q86UP3 3567 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 EML5Q05BV3 1969 aa14.02□□□□□ -0.17
LINC00339-203ENST00000420503 CACNA1GO43497 2377 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 TISP43B9A030 160 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 SLC30A4O14863 429 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 EXTL3O43909 919 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 RETP07949 1114 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 ADRB1P08588 477 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 NFICP08651 508 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 PLS3P13797 630 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 ATF6P18850 670 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 GUCY2CP25092 1073 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 U2AF2P26368 475 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 MARCKSP29966 332 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 LRPAP1P30533 357 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 MATR3P43243 847 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 TRAPPC10P48553 1259 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 SLC12A3P55017 1021 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 FCHO2Q0JRZ9 810 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 PDIA5Q14554 519 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 SF3A2Q15428 464 aaKnown RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 ENOX2Q16206 610 aaKnown RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 ARSHQ5FYA8 562 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 GPR158Q5T848 1215 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 KRT79Q5XKE5 535 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 SCARA3Q6AZY7 606 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 SLC39A4Q6P5W5 647 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 MAMSTRQ6ZN01 415 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 PRR23CQ6ZRP0 262 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 SPEM1Q8N4L4 309 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 FAM160A2Q8N612 972 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 GPR161Q8N6U8 529 aaKnown RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 CELF5Q8N6W0 485 aaKnown RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 CSGALNACT1Q8TDX6 532 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 SPIRE2Q8WWL2 714 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 FAM84AQ96KN4 292 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 KIF2CQ99661 725 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 NTPCRQ9BSD7 190 aaKnown RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 SMOC1Q9H4F8 434 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 RALYQ9UKM9 306 aaKnown RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 RAB23Q9ULC3 237 aa14.01□□□□□ -0.17
LINC00339-203ENST00000420503 NOL7Q9UMY1 257 aaKnown RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 RBM19Q9Y4C8 960 aaKnown RBP14.01□□□□□ -0.17
LINC00339-203ENST00000420503 MYBPHLA2RUH7 354 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 OTOL1A6NHN0 477 aaPredicted RBP14□□□□□ -0.17
LINC00339-203ENST00000420503 CHADO15335 359 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 GABRR2P28476 465 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 STRN3Q13033 797 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 GPR17Q13304 367 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 DSTYKQ6XUX3 929 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14□□□□□ -0.17
LINC00339-203ENST00000420503 DNAJB7Q7Z6W7 309 aaPredicted RBP14□□□□□ -0.17
LINC00339-203ENST00000420503 YAF2Q8IY57 180 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 FAM212AQ96EL1 285 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 LLPHQ9BRT6 129 aaKnown RBP14□□□□□ -0.17
LINC00339-203ENST00000420503 ATXN3LQ9H3M9 355 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 IL21Q9HBE4 155 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 GREB1Q4ZG55 1949 aa14□□□□□ -0.17
LINC00339-203ENST00000420503 CLDN3O15551 220 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 CLTAP09496 248 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 PLA2G4BP0C869 781 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 NMT1P30419 496 aaKnown RBP13.99□□□□□ -0.17
LINC00339-203ENST00000420503 GPR15P49685 360 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 EPHB3P54753 998 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 NRLP54845 237 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 PLD1Q13393 1074 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 CCINQ13939 588 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 CCDC142Q17RM4 750 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 TRIM68Q6AZZ1 485 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 OVOS1Q6IE37 1185 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 JADE1Q6IE81 842 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 ZPBP2Q6X784 338 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 LRRTM3Q86VH5 581 aa13.99□□□□□ -0.17
LINC00339-203ENST00000420503 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms