RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 CPA5Q8WXQ8 436 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 TFAP2BQ92481 460 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 KLK14Q9P0G3 267 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 SMIM28A0A1B0GU29 152 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 KCNE1P15382 129 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 CLCN6P51797 869 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 PTPN11Q06124 597 aaPredicted RBP22.36■■□□□ 1.17
GPC1-202ENST00000420138 PTK7Q13308 1070 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 NAA35Q5VZE5 725 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 TRIM72Q6ZMU5 477 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 MCOLN2Q8IZK6 566 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 RALGAPA2Q2PPJ7 1873 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 BRD2P25440 801 aaKnown RBP22.35■■□□□ 1.17
GPC1-202ENST00000420138 RAD23BP54727 409 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 MTFR1Q15390 333 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 TWF2Q6IBS0 349 aaKnown RBP22.35■■□□□ 1.17
GPC1-202ENST00000420138 MON1BQ7L1V2 547 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 DAAM2Q86T65 1068 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 PASD1Q8IV76 773 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 TWNKQ96RR1 684 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 CYP3A43Q9HB55 503 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 PAK6Q9NQU5 681 aaPredicted RBP22.35■■□□□ 1.17
GPC1-202ENST00000420138 CTTNBP2NLQ9P2B4 639 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 HMGXB4Q9UGU5 601 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 MYH10P35580 1976 aa22.35■■□□□ 1.17
GPC1-202ENST00000420138 CTAGE15A4D2H0 777 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 CILPO75339 1184 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 KIF4AO95239 1232 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 CTAGE8P0CG41 777 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 YWHAEP62258 255 aaKnown RBP22.34■■□□□ 1.17
GPC1-202ENST00000420138 PTPROQ16827 1216 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 FBXO47Q5MNV8 452 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 CTAGE6Q86UF2 777 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 CTAGE4Q8IX94 777 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 SYCE1Q8N0S2 351 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 SLC43A3Q8NBI5 491 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 BEST2Q8NFU1 509 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 ZNF653Q96CK0 615 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 DEFB118Q96PH6 123 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 ERVK-5Q9HDB9 667 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 CHST12Q9NRB3 414 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 OGFRQ9NZT2 677 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 PARP2Q9UGN5 583 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 A0A1W2PQ45 241 aaPredicted RBP22.34■■□□□ 1.17
GPC1-202ENST00000420138 A0A1W2PQY0 241 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 KBTBD13C9JR72 458 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 HSPA8P11142 646 aaKnown RBP22.34■■□□□ 1.17
GPC1-202ENST00000420138 CCL5P13501 91 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 PTP4A2Q12974 167 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 NFX1Q12986 1120 aaKnown RBP22.34■■□□□ 1.17
GPC1-202ENST00000420138 FAM26DQ5JW98 314 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 ZNF572Q7Z3I7 529 aaPredicted RBP22.34■■□□□ 1.17
GPC1-202ENST00000420138 ELOVL4Q9GZR5 314 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 RNF208Q9H0X6 261 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 EPC1Q9H2F5 836 aa22.34■■□□□ 1.17
GPC1-202ENST00000420138 UBQLN1Q9UMX0 589 aaKnown RBP22.34■■□□□ 1.17
GPC1-202ENST00000420138 CITO14578 2027 aa22.33■■□□□ 1.17
GPC1-202ENST00000420138 MEIS3P2A8K0S8 358 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 ZSCAN20P17040 1043 aaPredicted RBP22.33■■□□□ 1.16
GPC1-202ENST00000420138 SOX4Q06945 474 aaPredicted RBP22.33■■□□□ 1.16
GPC1-202ENST00000420138 INCA1Q0VD86 236 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 RPS6KA1Q15418 735 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 C9orf57Q5W0N0 161 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 PEX26Q7Z412 305 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 CTU1Q7Z7A3 348 aaKnown RBP22.33■■□□□ 1.16
GPC1-202ENST00000420138 LRRC52Q8N7C0 313 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 SLC4A11Q8NBS3 891 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 NOA1Q8NC60 698 aaKnown RBP22.33■■□□□ 1.16
GPC1-202ENST00000420138 HES6Q96HZ4 224 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 CALR3Q96L12 384 aaKnown RBP22.33■■□□□ 1.16
GPC1-202ENST00000420138 TSPAN18Q96SJ8 248 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 EHD2Q9NZN4 543 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 CNOT8Q9UFF9 292 aaKnown RBP22.33■■□□□ 1.16
GPC1-202ENST00000420138 PCDHGC3Q9UN70 934 aa22.33■■□□□ 1.16
GPC1-202ENST00000420138 PIRO00625 290 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 PTGESO14684 152 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 PAEPP09466 180 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 P4HA1P13674 534 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 RRM1P23921 792 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 NSFP46459 744 aaKnown RBP22.32■■□□□ 1.16
GPC1-202ENST00000420138 C2CD6Q53TS8 623 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 C11orf63Q6NUN7 778 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 PHF13Q86YI8 300 aaPredicted RBP22.32■■□□□ 1.16
GPC1-202ENST00000420138 WDTC1Q8N5D0 677 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 NUP85Q9BW27 656 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 AVENQ9NQS1 362 aaPredicted RBP22.32■■□□□ 1.16
GPC1-202ENST00000420138 STARD7Q9NQZ5 370 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 FAM105AQ9NUU6 356 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 ZNF446Q9NWS9 450 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 SMARCAL1Q9NZC9 954 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 UVRAGQ9P2Y5 699 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 PADI3Q9ULW8 664 aa22.32■■□□□ 1.16
GPC1-202ENST00000420138 GPR182O15218 404 aa22.31■■□□□ 1.16
GPC1-202ENST00000420138 CD52P31358 61 aa22.31■■□□□ 1.16
GPC1-202ENST00000420138 CDH5P33151 784 aaPredicted RBP22.31■■□□□ 1.16
GPC1-202ENST00000420138 DNA2P51530 1060 aa22.31■■□□□ 1.16
GPC1-202ENST00000420138 CKAP4Q07065 602 aaKnown RBP22.31■■□□□ 1.16
GPC1-202ENST00000420138 LPIN1Q14693 890 aa22.31■■□□□ 1.16
GPC1-202ENST00000420138 LLGL2Q6P1M3 1020 aa22.31■■□□□ 1.16
GPC1-202ENST00000420138 TMCO3Q6UWJ1 677 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms