RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 MPZL3Q6UWV2 235 aa12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 PRR23CQ6ZRP0 262 aa12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 SYT2Q8N9I0 419 aaPredicted RBP12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 TMEM161BQ8NDZ6 487 aa12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 BEST2Q8NFU1 509 aa12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 TMEM209Q96SK2 561 aa12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 CCDC94Q9BW85 323 aaPredicted RBP12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 YIPF1Q9Y548 306 aa12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 CEP295Q9C0D2 2601 aa12.78□□□□□ -0.36
CHCHD4-203ENST00000420103 ANK1P16157 1881 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 PPEF2O14830 753 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 MAPTP10636 758 aaKnown RBP12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 MCF2P10911 925 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 PLS3P13797 630 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 CCR3P51677 355 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 YARSP54577 528 aaKnown RBP12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 DUSP4Q13115 394 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 ST3GAL2Q16842 350 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 GAREM2Q75VX8 874 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 FAM160A2Q8N612 972 aaPredicted RBP12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 ZNF512Q96ME7 567 aaPredicted RBP12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 ACAP3Q96P50 834 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 GTSE1Q9NYZ3 720 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 SMC3Q9UQE7 1217 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 NUB1Q9Y5A7 615 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 CACNA1GO43497 2377 aa12.77□□□□□ -0.37
CHCHD4-203ENST00000420103 H7C4K7 107 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 CXCL8P10145 99 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 RPL9P32969 192 aaKnown RBP12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 MCM4P33991 863 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 TNFSF9P41273 254 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 PXNP49023 591 aaPredicted RBP12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 NRLP54845 237 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 NCKAP1LP55160 1127 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 TNK2Q07912 1038 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 FCHO2Q0JRZ9 810 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 DHX8Q14562 1220 aaKnown RBP12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 NOLC1Q14978 699 aaKnown RBP eCLIP12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 SF3A2Q15428 464 aaKnown RBP12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 CSRP2Q16527 193 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 IQCEQ6IPM2 695 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 ARID3BQ8IVW6 561 aaPredicted RBP12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 ATAD1Q8NBU5 361 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 NETO1Q8TDF5 533 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 DEPDC1BQ8WUY9 529 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 SPIRE2Q8WWL2 714 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 CHFRQ96EP1 664 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 CDK5RAP3Q96JB5 506 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 REEP2Q9BRK0 252 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 TCHPQ9BT92 498 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 ASAH2Q9NR71 780 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 TOPORSQ9NS56 1045 aaPredicted RBP12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 BLOC1S4Q9NUP1 217 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 SLC38A7Q9NVC3 462 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
CHCHD4-203ENST00000420103 MYBPHLA2RUH7 354 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 SPECC1L-ADORA2AF8WAN1 911 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 M0QZQ0 153 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 TM4SF5O14894 197 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 EXTL3O43909 919 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 PRAMEF12O95522 483 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 CPB1P15086 417 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 PON2Q15165 354 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 ZBTB6Q15916 424 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 ARL6IP4Q66PJ3 421 aaKnown RBP12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 ZNF280DQ6N043 979 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 APBB1IPQ7Z5R6 666 aaPredicted RBP12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 GPBP1Q86WP2 473 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 NTPCRQ9BSD7 190 aaKnown RBP12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 TIPINQ9BVW5 301 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 SMG9Q9H0W8 520 aaKnown RBP12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 SMOC1Q9H4F8 434 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 SLITRK6Q9H5Y7 841 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 C17orf75Q9HAS0 396 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 RAB23Q9ULC3 237 aa12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
CHCHD4-203ENST00000420103 OTOL1A6NHN0 477 aaPredicted RBP12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 AXIN1O15169 862 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 CHADO15335 359 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 TOM1L1O75674 476 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 OAZ2O95190 189 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 PAPSS2O95340 614 aaPredicted RBP12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 PLCG1P19174 1290 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 KCNA4P22459 653 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 CTHP32929 405 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 AARSP49588 968 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 KPNA1P52294 538 aaPredicted RBP12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 MCL1Q07820 350 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 STRN3Q13033 797 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 CCINQ13939 588 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 MCM6Q14566 821 aa12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 SF3A1Q15459 793 aaKnown RBP12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 N4BP2L1Q5TBK1 243 aaPredicted RBP12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 LARP1BQ659C4 914 aaKnown RBP12.74□□□□□ -0.37
CHCHD4-203ENST00000420103 NAIF1Q69YI7 327 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms