RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CYP11B1P15538 503 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 ITGB8P26012 769 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 EIF4A3P38919 411 aaKnown RBP15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 SCNN1GP51170 649 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 KIF11P52732 1056 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 NOMO2Q5JPE7 1267 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 GLRA4Q5JXX5 417 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 CLLU1OSQ5K130 101 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 FAM109BQ6ICB4 259 aaPredicted RBP15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 PPP1R2P3Q6NXS1 205 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 UNC93AQ86WB7 457 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 CCAR2Q8N163 923 aaKnown RBP15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 DDX1Q92499 740 aaKnown RBP15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 LPPQ93052 612 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 ARID3AQ99856 593 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 PPP1R12CQ9BZL4 782 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 INTUQ9ULD6 942 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 PCDHB7Q9Y5E2 793 aa15.25■□□□□ 0.03
SHMT1P1-201ENST00000419974 CILPO75339 1184 aa15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 IPO7O95373 1038 aaKnown RBP15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 MSNP26038 577 aaKnown RBP15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 AFF1P51825 1210 aaKnown RBP15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 TNNC1P63316 161 aa15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 CDR2Q01850 454 aa15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 TCTN1Q2MV58 587 aa15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 DCLRE1AQ6PJP8 1040 aa15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 URGCPQ8TCY9 931 aa15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 CASD1Q96PB1 797 aa15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 AGPAT1Q99943 283 aa15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 MRPL9Q9BYD2 267 aaKnown RBP15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 LUC7LQ9NQ29 371 aaKnown RBP15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 BARX2Q9UMQ3 279 aaPredicted RBP15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 PPP2R2CQ9Y2T4 447 aa15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 LAMA2P24043 3122 aaKnown RBP15.24■□□□□ 0.03
SHMT1P1-201ENST00000419974 ARHGEF37A1IGU5 675 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 CYP26A1O43174 497 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 AKR1B10O60218 316 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 PLEKP08567 350 aaPredicted RBP15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 PDE6CP51160 858 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 GUCY2FP51841 1108 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 MTF1Q14872 753 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 SHHQ15465 462 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 SPA17Q15506 151 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 TDRD12Q587J7 1177 aaKnown RBP15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 TRIM72Q6ZMU5 477 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 TOGARAM2Q6ZUX3 1019 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 TMEM86AQ8N2M4 240 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 TOP1MTQ969P6 601 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 TMEM175Q9BSA9 504 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 DNAI2Q9GZS0 605 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 DEF6Q9H4E7 631 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 IL23AQ9NPF7 189 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 ADAMTS1Q9UHI8 967 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 NAGPAQ9UK23 515 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 PCDHGC3Q9UN70 934 aa15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 REXO2Q9Y3B8 237 aaKnown RBP15.23■□□□□ 0.03
SHMT1P1-201ENST00000419974 A0A087X0T9 212 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 BTNL10A8MVZ5 291 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 M0QZQ0 153 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 PODXLO00592 558 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 GABRDO14764 452 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 ZNF263O14978 683 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 SPTLC1O15269 473 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 PJA2O43164 708 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 CYP11A1P05108 521 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 FAM228BP0C875 321 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 FPGSQ05932 587 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 PPIGQ13427 754 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 STILQ15468 1287 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 SOWAHAQ2M3V2 549 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 TMEM270Q6UE05 265 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 NOP9Q86U38 636 aaKnown RBP15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 SLC47A2Q86VL8 602 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 REXO1L1PQ8IX06 675 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 COLGALT2Q8IYK4 626 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 RBBP8NLQ8NC74 664 aaPredicted RBP15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 WHAMMQ8TF30 809 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 SDCBP2Q9H190 292 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 ISCUQ9H1K1 167 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 NXF1Q9UBU9 619 aaKnown RBP15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 PCDHB4Q9Y5E5 795 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 TTC3P53804 2025 aa15.22■□□□□ 0.03
SHMT1P1-201ENST00000419974 PPEF2O14830 753 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 DGKIO75912 1065 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 WEE2P0C1S8 567 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 PNMA6AP0CW24 399 aaPredicted RBP15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 CHRNB2P17787 502 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 CLCNKBP51801 687 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 VAV2P52735 878 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 ARID5AQ03989 594 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 TCEAL1Q15170 157 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 C9orf50Q5SZB4 431 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 ALKBH5Q6P6C2 394 aaKnown RBP15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 CD300LGQ6UXG3 332 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 ABI1Q8IZP0 508 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 CRYBG2Q8N1P7 616 aa15.21■□□□□ 0.03
SHMT1P1-201ENST00000419974 DEFB123Q8N688 67 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms