RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 CARSP49589 748 aaKnown RBP9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 RAD23BP54727 409 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 RWDD2BP57060 319 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 OSTNP61366 133 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 TAP1Q03518 808 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 GPS2Q13227 327 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 CRHR2Q13324 411 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 MAMLD1Q13495 774 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 HIC1Q14526 733 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 SIX1Q15475 284 aaPredicted RBP9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 ZBTB6Q15916 424 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 PRAMEF19Q5SWL8 479 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 NOTUMQ6P988 496 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 SLC27A1Q6PCB7 646 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 ALKAL1Q6UXT8 129 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 RUFY4Q6ZNE9 571 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 CPNE8Q86YQ8 564 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 GSPT2Q8IYD1 628 aaKnown RBP9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 TMEM35BQ8NCS4 154 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM71BQ8TC56 605 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 TFAP2BQ92481 460 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 DDX27Q96GQ7 796 aaKnown RBP9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 BTBD6Q96KE9 485 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 SNX27Q96L92 541 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 RUNDC3BQ96NL0 473 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 ACAP3Q96P50 834 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 C11orf70Q9BRQ4 267 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 PLVAPQ9BX97 442 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 AP1M1Q9BXS5 423 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 AP5M1Q9H0R1 490 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 DDX47Q9H0S4 455 aaKnown RBP9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 SDCBP2Q9H190 292 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 EPB41L5Q9HCM4 733 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 PCYOX1Q9UHG3 505 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 POLIQ9UNA4 740 aa9.63□□□□□ -0.87
LINCMD1-201ENST00000418518 ZSCAN5CA6NGD5 496 aaPredicted RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 TMEM110-MUSTN1A8MSY1 372 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 MYO1FO00160 1098 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 TNPO2O14787 897 aaKnown RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 MED7O43513 233 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 DUSP11O75319 330 aaKnown RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 WEE2P0C1S8 567 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 PYGMP11217 842 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 CYBAP13498 195 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 AKR1A1P14550 325 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 CYP2B6P20813 491 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 CTGFP29279 349 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 HSPA9P38646 679 aaKnown RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 PTGIRP43119 386 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 FNTAP49354 379 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 DRG2P55039 364 aaKnown RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 GJA9P57773 515 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 RNASE9P60153 205 aaKnown RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 RBP5P82980 135 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 PURAQ00577 322 aaKnown RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 GUCY2DQ02846 1103 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 PTPN11Q06124 597 aaPredicted RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 ZNF211Q13398 564 aaPredicted RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 SNX17Q15036 470 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 FSCN1Q16658 493 aaKnown RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 KIZQ2M2Z5 673 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 XKR4Q5GH76 650 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 LRRC38Q5VT99 294 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 SCARA5Q6ZMJ2 495 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 MMS22LQ6ZRQ5 1243 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 SND1Q7KZF4 910 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 CATSPER4Q7RTX7 472 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 SLC13A5Q86YT5 568 aaPredicted RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 PASD1Q8IV76 773 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 KLHL7Q8IXQ5 586 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 KATNAL2Q8IYT4 538 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 ZDHHC14Q8IZN3 488 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 NME8Q8N427 588 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 NIPA2Q8N8Q9 360 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 PRELID2Q8N945 189 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 SLC4A11Q8NBS3 891 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 C3orf20Q8ND61 904 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 FEZF2Q8TBJ5 459 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 MAIP1Q8WWC4 291 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 SLCO2A1Q92959 643 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 LENG1Q96BZ8 264 aaPredicted RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 SCLT1Q96NL6 688 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 PPP1R16BQ96T49 567 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 SH3GL2Q99962 352 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM129AQ9BZQ8 928 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 TRIM7Q9C029 511 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 ERVK-5Q9HDB9 667 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 FAM114A2Q9NRY5 505 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 PARVAQ9NVD7 372 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 CNTN3Q9P232 1028 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 CHORDC1Q9UHD1 332 aaPredicted RBP9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 STRIP2Q9ULQ0 834 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 NR2E1Q9Y466 385 aa9.62□□□□□ -0.87
LINCMD1-201ENST00000418518 TSC2P49815 1807 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 A0A0U1RQG5 324 aaPredicted RBP9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 TMEM191CA6NGB0 347 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 AGPSO00116 658 aa9.61□□□□□ -0.87
LINCMD1-201ENST00000418518 CAPN15O75808 1086 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms