RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CLK2P49760 499 aaKnown RBP8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 MYL7Q01449 175 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 CYLC2Q14093 348 aaPredicted RBP8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 ULK2Q8IYT8 1036 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 DIS3LQ8TF46 1054 aaKnown RBP8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 HERPUD2Q9BSE4 406 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 RUSC1Q9BVN2 902 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 YIPF2Q9BWQ6 316 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 TSSK1BQ9BXA7 367 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 USP29Q9HBJ7 922 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 SAYSD1Q9NPB0 183 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 SLC7A8Q9UHI5 535 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 SLC24A2Q9UI40 661 aa8.46□□□□□ -1.05
HMGXB4-202ENST00000418170 WDR91A4D1P6 747 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 H3BRJ5 948 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 EIF4BP23588 611 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 EMP3P54852 163 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 PHEXP78562 749 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 XIAPP98170 497 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 CENPCQ03188 943 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 UBE2SQ16763 222 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 AAGABQ6PD74 315 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 MAP7D3Q8IWC1 876 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 SMYD1Q8NB12 490 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 FAM172AQ8WUF8 416 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 OXNAD1Q96HP4 312 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 PCDHB18PQ96TA0 734 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 RANBP17Q9H2T7 1088 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 PSMC3IPQ9P2W1 217 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 PAIP2BQ9ULR5 123 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 R3HDM2Q9Y2K5 976 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 ZNFX1Q9P2E3 1918 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 SRCAPQ6ZRS2 3230 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 PIK3CDO00329 1044 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 TM9SF1O15321 606 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 VCLP18206 1134 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 GEMIN4P57678 1058 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 RPL26P61254 145 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 PSMC6P62333 389 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 DHDDSQ86SQ9 333 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 ALDH16A1Q8IZ83 802 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 RBM15BQ8NDT2 890 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 FBXO27Q8NI29 283 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 LMO3Q8TAP4 145 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 GAB3Q8WWW8 586 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC5A5Q92911 643 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 ABTB1Q969K4 478 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC35B4Q969S0 331 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 ANKRD2Q9GZV1 360 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 UVRAGQ9P2Y5 699 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 TUBGCP4Q9UGJ1 667 aa8.46□□□□□ -1.06
HMGXB4-202ENST00000418170 SNED1Q8TER0 1413 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 CAPN14A8MX76 684 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 RSPH10B2B2RC85 870 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 RSPH10BP0C881 870 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 TRIM49P0CI25 452 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 TRIM49CP0CI26 452 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 SMIM18P0DKX4 95 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 CPA2P48052 419 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 CHN2P52757 468 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 GPSM2P81274 684 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 MSLNQ13421 630 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 SEPT7Q16181 437 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 SFT2D3Q587I9 215 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 C1orf146Q5VVC0 180 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 UGT2A3Q6UWM9 527 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 NMUR2Q9GZQ4 415 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 C17orf75Q9HAS0 396 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 ARMCX1Q9P291 453 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 GTF3C4Q9UKN8 822 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 STRNO43815 780 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 PGM3O95394 542 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 VIL1P09327 827 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 RPL5P46777 297 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 ERFP50548 548 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 TBL3Q12788 808 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 DCTN2Q13561 401 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 CCDC142Q17RM4 750 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 MAP3K21Q5TCX8 1036 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 PPP1R18Q6NYC8 613 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 C1orf228Q6PIY5 440 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 RBM44Q6ZP01 1051 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 FBXO33Q7Z6M2 555 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 CATSPER3Q86XQ3 398 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 VTI1AQ96AJ9 217 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 MTBPQ96DY7 904 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 SETDB2Q96T68 719 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 OLFML3Q9NRN5 406 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 POLIQ9UNA4 740 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 DNM3Q9UQ16 869 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 ATRNL1Q5VV63 1379 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 SPATA31A6Q5VVP1 1343 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 F5H6K3 240 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 CAMTA2O94983 1202 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 KLRC2P26717 231 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 ADSSP30520 456 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 STAT3P40763 770 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC1A1P43005 524 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 CD97P48960 835 aa8.45□□□□□ -1.06
HMGXB4-202ENST00000418170 ARL4CP56559 192 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms