RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ALDH1A3P47895 512 aa27.41■■□□□ 1.98
VEGFA-208ENST00000417285 EPHB3P54753 998 aa27.41■■□□□ 1.98
VEGFA-208ENST00000417285 MLF2Q15773 248 aaPredicted RBP27.41■■□□□ 1.98
VEGFA-208ENST00000417285 TANGO2Q6ICL3 276 aa27.41■■□□□ 1.98
VEGFA-208ENST00000417285 OSBPL6Q9BZF3 934 aa27.41■■□□□ 1.98
VEGFA-208ENST00000417285 LDHAP00338 332 aaKnown RBP27.4■■□□□ 1.98
VEGFA-208ENST00000417285 IDEP14735 1019 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 DUSP4Q13115 394 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 FAM78AQ5JUQ0 283 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 CENPPQ6IPU0 288 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 CRELD2Q6UXH1 353 aaPredicted RBP27.4■■□□□ 1.98
VEGFA-208ENST00000417285 METTL23Q86XA0 190 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 PJA1Q8NG27 643 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 NELL2Q99435 816 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 TBC1D7Q9P0N9 293 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 DLGAP2Q9P1A6 1054 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 YIPF1Q9Y548 306 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 ASB3Q9Y575 518 aa27.4■■□□□ 1.98
VEGFA-208ENST00000417285 A0A087X0B3 334 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 FRMD3A2A2Y4 597 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 SPTLC1O15269 473 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 GCNT3O95395 438 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 DCNP07585 359 aaKnown RBP27.39■■□□□ 1.98
VEGFA-208ENST00000417285 OR4Q2P0C623 313 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 ZSCAN22P10073 491 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-208ENST00000417285 MYL4P12829 197 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 CCR2P41597 374 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 FOXD4L5Q5VV16 416 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-208ENST00000417285 FRMD5Q7Z6J6 570 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 HS6ST3Q8IZP7 471 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 SYCP3Q8IZU3 236 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 PDILTQ8N807 584 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 FOXD4L4Q8WXT5 416 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-208ENST00000417285 SMARCD2Q92925 531 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 NKD2Q969F2 451 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-208ENST00000417285 ASB16Q96NS5 453 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 PGLYRP2Q96PD5 576 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 PLA2G2FQ9BZM2 168 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 PANK4Q9NVE7 773 aa27.39■■□□□ 1.98
VEGFA-208ENST00000417285 VPS13AQ96RL7 3174 aa27.38■■□□□ 1.97
VEGFA-208ENST00000417285 GARTP22102 1010 aa27.38■■□□□ 1.97
VEGFA-208ENST00000417285 TAF6P49848 677 aa27.38■■□□□ 1.97
VEGFA-208ENST00000417285 KCNA1Q09470 495 aa27.38■■□□□ 1.97
VEGFA-208ENST00000417285 POTEHQ6S545 545 aa27.38■■□□□ 1.97
VEGFA-208ENST00000417285 THEM5Q8N1Q8 247 aa27.38■■□□□ 1.97
VEGFA-208ENST00000417285 SEMA4AQ9H3S1 761 aa27.38■■□□□ 1.97
VEGFA-208ENST00000417285 TMEM206Q9H813 350 aa27.38■■□□□ 1.97
VEGFA-208ENST00000417285 CYB561D2O14569 222 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 CUTAO60888 179 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 VNN2O95498 520 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 SMARCB1Q12824 385 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 C1orf210Q8IVY1 113 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 CCDC65Q8IXS2 484 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 CACTINQ8WUQ7 758 aaKnown RBP27.37■■□□□ 1.97
VEGFA-208ENST00000417285 E2F7Q96AV8 911 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 FAM213AQ9BRX8 229 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 TRMT61BQ9BVS5 477 aaKnown RBP27.37■■□□□ 1.97
VEGFA-208ENST00000417285 FOXQ1Q9C009 403 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 IKZF4Q9H2S9 585 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 CUEDC2Q9H467 287 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 TRPV4Q9HBA0 871 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 MYH15Q9Y2K3 1946 aa27.37■■□□□ 1.97
VEGFA-208ENST00000417285 FGF19O95750 216 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 F13A1P00488 732 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 FCARP24071 287 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 PNPLA4P41247 253 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 TUFMP49411 452 aaKnown RBP27.36■■□□□ 1.97
VEGFA-208ENST00000417285 STXBP4Q6ZWJ1 553 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 ATAD1Q8NBU5 361 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 DNASE1L2Q92874 299 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 BCO2Q9BYV7 579 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 TNMDQ9H2S6 317 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 SLC27A5Q9Y2P5 690 aa27.36■■□□□ 1.97
VEGFA-208ENST00000417285 MRPS17Q9Y2R5 130 aaKnown RBP27.36■■□□□ 1.97
VEGFA-208ENST00000417285 MTMR11A4FU01 709 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 PRR23AA6NEV1 266 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 FAM170BA6NMN3 283 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 KPNA7A9QM74 516 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 NCAM2O15394 837 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 MOSPD3O75425 235 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 MAGEA9P43362 315 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 AMPD3Q01432 767 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 SV2CQ496J9 727 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 ZNF852Q6ZMS4 543 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 ASCL5Q7RTU5 278 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 ITIH5Q86UX2 942 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 KCNG4Q8TDN1 519 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 C2orf15Q8WU43 125 aaKnown RBP27.35■■□□□ 1.97
VEGFA-208ENST00000417285 IRF7Q92985 503 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 ZSWIM3Q96MP5 696 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 PYM1Q9BRP8 204 aaKnown RBP27.35■■□□□ 1.97
VEGFA-208ENST00000417285 LRRC3Q9BY71 257 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 CRISPLD1Q9H336 500 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 BRD9Q9H8M2 597 aa27.35■■□□□ 1.97
VEGFA-208ENST00000417285 KIAA0391O15091 583 aaKnown RBP27.34■■□□□ 1.97
VEGFA-208ENST00000417285 PSMC3P17980 439 aa27.34■■□□□ 1.97
VEGFA-208ENST00000417285 UBXN2BQ14CS0 331 aa27.34■■□□□ 1.97
VEGFA-208ENST00000417285 FOXD4L6Q3SYB3 417 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-208ENST00000417285 ATL3Q6DD88 541 aa27.34■■□□□ 1.97
VEGFA-208ENST00000417285 FOXD4L3Q6VB84 417 aaPredicted RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms