RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 FATE1Q969F0 183 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 FBXW5Q969U6 566 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 RGMAQ96B86 450 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 NACC2Q96BF6 587 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 NRBF2Q96F24 287 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SIPA1Q96FS4 1042 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 VPS50Q96JG6 964 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 DACH2Q96NX9 599 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC2A13Q96QE2 648 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CTAGE1Q96RT6 745 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM118BQ9BPY3 351 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 NOL10Q9BSC4 688 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TTPALQ9BTX7 342 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PHF20Q9BVI0 1012 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TEX12Q9BXU0 123 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 MKRN2Q9H000 416 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 QRSL1Q9H0R6 528 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 C14orf93Q9H972 538 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ZMAT3Q9HA38 289 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 SP110Q9HB58 689 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CYP4F12Q9HCS2 524 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 ATP13A1Q9HD20 1204 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TM9SF3Q9HD45 589 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TRPV5Q9NQA5 729 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CNNM1Q9NRU3 951 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 GPR27Q9NS67 375 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 NMRK1Q9NWW6 199 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 COQ3Q9NZJ6 369 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 CGGBP1Q9UFW8 167 aaPredicted RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 IL19Q9UHD0 177 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 PTBP2Q9UKA9 531 aaKnown RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 EXOC7Q9UPT5 735 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 AURKCQ9UQB9 309 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 MAN2B2Q9Y2E5 1009 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 NPFFR2Q9Y5X5 522 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 TTC21BQ7Z4L5 1316 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 KIF16BQ96L93 1317 aa3.37□□□□□ -1.87
CTDSPL-203ENST00000416688 AKNAQ7Z591 1439 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CYP2D7A0A087X1C5 515 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 LRRD1A4D1F6 860 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CTAGE15A4D2H0 777 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 AGAP14A8MT82 685 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 NUDT19A8MXV4 375 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF225M0QZC1 329 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 C2CD2LO14523 706 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 WNT9AO14904 365 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ZNF263O14978 683 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 AXIN1O15169 862 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SPOPO43791 374 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TBC1D4O60343 1298 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 KINO60870 393 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TRPA1O75762 1119 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT37O76014 449 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 EPN2O95208 641 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 GGPS1O95749 300 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TK1P04183 234 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CLEC3BP05452 202 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SLFN14P0C7P3 912 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CTAGE8P0CG41 777 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 BCRP11274 1271 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 PDGFRAP16234 1089 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC9A1P19634 815 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SAT1P21673 171 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TGM1P22735 817 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TARSP26639 723 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ABCD3P28288 659 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 GRNP28799 593 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ADSLP30566 484 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 TLX1P31314 330 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SOX6P35712 828 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CAPZA2P47755 286 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CENPAP49450 140 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 HDAC4P56524 1084 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 INHBEP58166 350 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 STARD6P59095 220 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 HAND2P61296 217 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ETF1P62495 437 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SARNPP82979 210 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SCN1BQ07699 218 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SP140Q13342 867 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 MXD4Q14582 209 aaPredicted RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 RAB30Q15771 203 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 GRIK5Q16478 980 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CRY1Q16526 586 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 UGT8Q16880 541 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 KIZQ2M2Z5 673 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 KRT71Q3SY84 523 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 BOLA3Q53S33 107 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 KCNT1Q5JUK3 1230 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 PRAMEF14Q5SWL7 426 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 PLEKHS1Q5SXH7 462 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 FAXCQ5TGI0 409 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ARL6IP4Q66PJ3 421 aaKnown RBP3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 ATG16L1Q676U5 607 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 CREB3L3Q68CJ9 461 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 BORAQ6PGQ7 559 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 LRFN4Q6PJG9 635 aa3.36□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC2A7Q6PXP3 512 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms