RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 TANC1Q9C0D5 1861 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 TLDC2A0PJX2 215 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 TAF4O00268 1085 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 MMEP08473 750 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 MC4RP32245 332 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 SOWAHCQ53LP3 525 aaPredicted RBP6.25□□□□□ -1.41
CSTF1-202ENST00000415828 TM4SF20Q53R12 229 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 PRR31Q5SQ13 230 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 CCDC174Q6PII3 467 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 GPR142Q7Z601 462 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 TMEM199Q8N511 208 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 STPG3Q8N7X2 389 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 CHST14Q8NCH0 376 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 HIPK4Q8NE63 616 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 IGDCC4Q8TDY8 1250 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 PHACTR3Q96KR7 559 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 BOCQ9BWV1 1114 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 KCNH7Q9NS40 1196 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 MORF4L1Q9UBU8 362 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 CACNA1IQ9P0X4 2223 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 TNKSO95271 1327 aa6.25□□□□□ -1.41
CSTF1-202ENST00000415828 RFX7Q2KHR2 1363 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 PTPDC1A2A3K4 754 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 LCHNA4D1U4 455 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 ENPP3O14638 875 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 ZNF28P17035 718 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 GCLCP48506 637 aaPredicted RBP6.24□□□□□ -1.41
CSTF1-202ENST00000415828 SMAD2Q15796 467 aaKnown RBP6.24□□□□□ -1.41
CSTF1-202ENST00000415828 ARHGAP44Q17R89 818 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 PRAMEF19Q5SWL8 479 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 MFSD14CQ5VZR4 134 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 LRRTM3Q86VH5 581 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 ANKRD18AQ8IVF6 992 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 TXNDC5Q8NBS9 432 aaKnown RBP6.24□□□□□ -1.41
CSTF1-202ENST00000415828 ZCCHC14Q8WYQ9 949 aaKnown RBP6.24□□□□□ -1.41
CSTF1-202ENST00000415828 ERCC4Q92889 916 aaPredicted RBP6.24□□□□□ -1.41
CSTF1-202ENST00000415828 TMEM168Q9H0V1 697 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 INTS7Q9NVH2 962 aaKnown RBP6.24□□□□□ -1.41
CSTF1-202ENST00000415828 FTSJ1Q9UET6 329 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 MTUS1Q9ULD2 1270 aa6.24□□□□□ -1.41
CSTF1-202ENST00000415828 SPTAN1Q13813 2472 aaKnown RBP6.24□□□□□ -1.41
CSTF1-202ENST00000415828 SPTA1P02549 2419 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 MROH6A6NGR9 719 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 FOXP2O15409 715 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 LMNAP02545 664 aaKnown RBP6.23□□□□□ -1.41
CSTF1-202ENST00000415828 ITGB3P05106 788 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 PROS1P07225 676 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 PTGS1P23219 599 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 AOAHP28039 575 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 HSP90AB3PQ58FF7 597 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 FAM26FQ5R3K3 315 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 SDE2Q6IQ49 451 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 EDC3Q96F86 508 aaKnown RBP6.23□□□□□ -1.41
CSTF1-202ENST00000415828 GBP4Q96PP9 640 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 INCENPQ9NQS7 918 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 UCKL1Q9NWZ5 548 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 CNOT11Q9UKZ1 510 aaKnown RBP6.23□□□□□ -1.41
CSTF1-202ENST00000415828 PLAAQ9Y263 795 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 INVSQ9Y283 1065 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 ZKSCAN5Q9Y2L8 839 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 B3GALT1Q9Y5Z6 326 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 FBN2P35556 2912 aa6.23□□□□□ -1.41
CSTF1-202ENST00000415828 CBX4O00257 560 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 MBTPS2O43462 519 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 IL18BPO95998 194 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 PGK1P00558 417 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 MECP2P51608 486 aaKnown RBP6.22□□□□□ -1.41
CSTF1-202ENST00000415828 KIF11P52732 1056 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 CCL23P55773 120 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 EIF4A1P60842 406 aaKnown RBP6.22□□□□□ -1.41
CSTF1-202ENST00000415828 HERVK_113P62684 666 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 TAF7LQ5H9L4 462 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 PLEKHH3Q7Z736 793 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 KIAA0907Q7Z7F0 614 aaPredicted RBP6.22□□□□□ -1.41
CSTF1-202ENST00000415828 FAM124AQ86V42 546 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 NUDT10Q8NFP7 164 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 WDR48Q8TAF3 677 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 ASB15Q8WXK1 588 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 DLG3Q92796 817 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 MFSD3Q96ES6 412 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 NUDT11Q96G61 164 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 LCORQ96JN0 433 aaPredicted RBP6.22□□□□□ -1.41
CSTF1-202ENST00000415828 RBM15Q96T37 977 aaKnown RBP eCLIP6.22□□□□□ -1.41
CSTF1-202ENST00000415828 ISCA1Q9BUE6 129 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 TARS2Q9BW92 718 aaKnown RBP6.22□□□□□ -1.41
CSTF1-202ENST00000415828 MTIF3Q9H2K0 278 aaKnown RBP6.22□□□□□ -1.41
CSTF1-202ENST00000415828 PCIF1Q9H4Z3 704 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 R4GN57 208 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 MYH2Q9UKX2 1941 aa6.22□□□□□ -1.41
CSTF1-202ENST00000415828 NBPF19A0A087WUL8 3843 aa6.21□□□□□ -1.42
CSTF1-202ENST00000415828 SEPT4O43236 478 aa6.21□□□□□ -1.42
CSTF1-202ENST00000415828 FKBP1AP62942 108 aaKnown RBP6.21□□□□□ -1.42
CSTF1-202ENST00000415828 WDR72Q3MJ13 1102 aa6.21□□□□□ -1.42
CSTF1-202ENST00000415828 CCDC152Q4G0S7 254 aa6.21□□□□□ -1.42
CSTF1-202ENST00000415828 BORAQ6PGQ7 559 aa6.21□□□□□ -1.42
CSTF1-202ENST00000415828 TMCO2Q7Z6W1 182 aaPredicted RBP6.21□□□□□ -1.42
CSTF1-202ENST00000415828 FAM83AQ86UY5 434 aa6.21□□□□□ -1.42
CSTF1-202ENST00000415828 SCYL3Q8IZE3 742 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms