RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 ZNF541Q9H0D2 1346 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 A0A1W2PPC1 479 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 PRR5-ARHGAP8B1AHC4 643 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 ELL2O00472 640 aaPredicted RBP3.3□□□□□ -1.88
LINC00428-201ENST00000415620 C1QL1O75973 258 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 SPDEFO95238 335 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 HSP90B1P14625 803 aaKnown RBP3.3□□□□□ -1.88
LINC00428-201ENST00000415620 SLC9A1P19634 815 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 IGFALSP35858 605 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 NOGQ13253 232 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 ZNF174Q15697 407 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 TIGD7Q6NT04 549 aaPredicted RBP3.3□□□□□ -1.88
LINC00428-201ENST00000415620 XYLT1Q86Y38 959 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 C7orf31Q8N865 590 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 FUBP1Q96AE4 644 aaKnown RBP3.3□□□□□ -1.88
LINC00428-201ENST00000415620 ZNF778Q96MU6 729 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 FDXACB1Q9BRP7 624 aaPredicted RBP3.3□□□□□ -1.88
LINC00428-201ENST00000415620 POFUT1Q9H488 388 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 INTS7Q9NVH2 962 aaKnown RBP3.3□□□□□ -1.88
LINC00428-201ENST00000415620 USP36Q9P275 1121 aaKnown RBP3.3□□□□□ -1.88
LINC00428-201ENST00000415620 HACL1Q9UJ83 578 aa3.3□□□□□ -1.88
LINC00428-201ENST00000415620 PALLDQ8WX93 1383 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 ANKRD30AQ9BXX3 1397 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 DNAH14Q0VDD8 3507 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 MYO15AQ9UKN7 3530 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 ACEP12821 1306 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 MYPNQ86TC9 1320 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 SALL3Q9BXA9 1300 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 A0A1W2PR48 441 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 CBX4O00257 560 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 PLD2O14939 933 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 PROP1O75360 226 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 CELF2O95319 508 aaKnown RBP3.29□□□□□ -1.88
LINC00428-201ENST00000415620 ITGAMP11215 1152 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 RARRES1P49788 294 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 KIF23Q02241 960 aaPredicted RBP3.29□□□□□ -1.88
LINC00428-201ENST00000415620 FAM102AQ5T9C2 384 aaPredicted RBP3.29□□□□□ -1.88
LINC00428-201ENST00000415620 PIK3R6Q5UE93 754 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 PNMA8AQ86V59 439 aaPredicted RBP3.29□□□□□ -1.88
LINC00428-201ENST00000415620 SLC44A3Q8N4M1 653 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 RTF1Q92541 710 aaKnown RBP3.29□□□□□ -1.88
LINC00428-201ENST00000415620 CLUHP3Q96NS8 147 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 DEPDC7Q96QD5 511 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 NEU1Q99519 415 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 ZMAT4Q9H898 229 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 SNTG2Q9NY99 539 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 PCDHB6Q9Y5E3 794 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 KDM3BQ7LBC6 1761 aa3.29□□□□□ -1.88
LINC00428-201ENST00000415620 REV3LO60673 3130 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 ANKRD50Q9ULJ7 1429 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 SLX4Q8IY92 1834 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 FAM208AQ9UK61 1670 aaKnown RBP3.28□□□□□ -1.88
LINC00428-201ENST00000415620 CGB1A6NKQ9 187 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 ASLP04424 464 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 PFKMP08237 780 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 GPR15P49685 360 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 DUSP2Q05923 314 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 ZNF169Q14929 603 aaPredicted RBP3.28□□□□□ -1.88
LINC00428-201ENST00000415620 ZBTB41Q5SVQ8 909 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 ANKS6Q68DC2 871 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 ZNF425Q6IV72 752 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 ARMC6Q6NXE6 501 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 ZZZ3Q8IYH5 903 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 CDYL2Q8N8U2 506 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 OR10H5Q8NGA6 315 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 MAFAQ8NHW3 353 aaPredicted RBP3.28□□□□□ -1.88
LINC00428-201ENST00000415620 WASF1Q92558 559 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 ORAI3Q9BRQ5 295 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 CABP5Q9NP86 173 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 PODXL2Q9NZ53 605 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 STAP2Q9UGK3 403 aa3.28□□□□□ -1.88
LINC00428-201ENST00000415620 TCF20Q9UGU0 1960 aaKnown RBP3.28□□□□□ -1.88
LINC00428-201ENST00000415620 CHD6Q8TD26 2715 aa3.28□□□□□ -1.89
LINC00428-201ENST00000415620 VPS8Q8N3P4 1428 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 TJP1Q07157 1748 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 LRRC3CA6NJW4 275 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 TBKBP1A7MCY6 615 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 B5MCH6 92 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 DNAJC8O75937 253 aaPredicted RBP3.27□□□□□ -1.89
LINC00428-201ENST00000415620 PCDH8O95206 1070 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 APOL3O95236 402 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 CFIP05156 583 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 RBP3P10745 1247 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 IL2RBP14784 551 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 MGAT1P26572 445 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 CACNA2D1P54289 1103 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 SIM1P81133 766 aaPredicted RBP3.27□□□□□ -1.89
LINC00428-201ENST00000415620 TMF1P82094 1093 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 DDR1Q08345 913 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 RESTQ13127 1097 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 ZNF460Q14592 562 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 FNDC3BQ53EP0 1204 aaKnown RBP3.27□□□□□ -1.89
LINC00428-201ENST00000415620 C2orf27AQ580R0 203 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 CCDC178Q5BJE1 867 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 SH2D3CQ8N5H7 860 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 PRAM1Q96QH2 718 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 DNAJC7Q99615 494 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 FOXJ2Q9P0K8 574 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 ZNF70Q9UC06 446 aaPredicted RBP3.27□□□□□ -1.89
LINC00428-201ENST00000415620 RALYQ9UKM9 306 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms