RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 FTOQ9C0B1 505 aaKnown RBP eCLIP2.93□□□□□ -1.94
MCF2-204ENST00000414978 MRPL18Q9H0U6 180 aaKnown RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 SIL1Q9H173 461 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 KCNH7Q9NS40 1196 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 TBC1D22BQ9NU19 505 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 FBXO2Q9UK22 296 aaPredicted RBP2.93□□□□□ -1.94
MCF2-204ENST00000414978 SYNPO2Q9UMS6 1093 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 COL4A1P02462 1669 aa2.93□□□□□ -1.94
MCF2-204ENST00000414978 H3BML4 177 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 FGF10O15520 208 aaPredicted RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 DGAT1O75907 488 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 KRT9P35527 623 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 TECP42680 631 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 EFR3AQ14156 821 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 ARHGAP44Q17R89 818 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 MFSD4BQ5TF39 518 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 LMBRD2Q68DH5 695 aaPredicted RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 LYPD4Q6UWN0 246 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 GAREM2Q75VX8 874 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 MIGA2Q7L4E1 593 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 MSL3Q8N5Y2 521 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 OR1N1Q8NGS0 311 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 ASB15Q8WXK1 588 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 IP6K1Q92551 441 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 JMJD8Q96S16 334 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 DMRTA2Q96SC8 542 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 SDF4Q9BRK5 362 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 DACT1Q9NYF0 836 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 NXF1Q9UBU9 619 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 SRRDQ9UH36 339 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 SCAF8Q9UPN6 1271 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 MAN2B2Q9Y2E5 1009 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 CDHR2Q9BYE9 1310 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 AHCYL1O43865 530 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 SGPL1O95470 568 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 TNFRSF8P28908 595 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 AKT1P31749 480 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 SLC5A3P53794 718 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 RTP1P59025 263 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 FOXO4P98177 505 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 PDCLQ13371 301 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 KRT32Q14532 448 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 DLGAP5Q15398 846 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 ANKRD34AQ69YU3 496 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 TANGO2Q6ICL3 276 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 TMCO3Q6UWJ1 677 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 DENND5BQ6ZUT9 1274 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 HEATR3Q7Z4Q2 680 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 ZFYVE21Q9BQ24 234 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 CHCHD6Q9BRQ6 235 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 NOL10Q9BSC4 688 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 C1orf43Q9BWL3 253 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 MAGEH1Q9H213 219 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 PRO3102Q9H379 93 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 SUGCTQ9HAC7 445 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 TDP1Q9NUW8 608 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 PALD1Q9ULE6 856 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 NAP1L2Q9ULW6 460 aaPredicted RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 NUDT19A8MXV4 375 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 F8W735 103 aaPredicted RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 OIP5O43482 229 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 HSP90AA1P07900 732 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 HDCP19113 662 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 TM4SF1P30408 202 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 LIFRP42702 1097 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 ADKP55263 362 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 RNASELQ05823 741 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 PLS1Q14651 629 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 MYBPC3Q14896 1274 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 NKPD1Q17RQ9 610 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 MUM1Q2TAK8 710 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 KHDC1Q4VXA5 237 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 SPECC1Q5M775 1068 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 E4F1Q66K89 784 aaPredicted RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 TIGD7Q6NT04 549 aaPredicted RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 PGBD2Q6P3X8 592 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 SLC22A25Q6T423 547 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 FASTKD5Q7L8L6 764 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 SRGAP1Q7Z6B7 1085 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 NBPF11Q86T75 865 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 SLC51AQ86UW1 340 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 DAGLBQ8NCG7 672 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 ZMIZ2Q8NF64 920 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 ANKS1AQ92625 1134 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 PAWRQ96IZ0 340 aaKnown RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 CLPTM1LQ96KA5 538 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 ACAP3Q96P50 834 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 PI4K2AQ9BTU6 479 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 ADI1Q9BV57 179 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 YIPF2Q9BWQ6 316 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 TAF1DQ9H5J8 278 aaPredicted RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 PLA2G2DQ9UNK4 145 aa2.92□□□□□ -1.94
MCF2-204ENST00000414978 TNRC18O15417 2968 aaPredicted RBP2.92□□□□□ -1.94
MCF2-204ENST00000414978 FSD2A1L4K1 749 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 FAM234BA2RU67 622 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 FCHO1O14526 889 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 ASNA1O43681 348 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 TBX18O95935 607 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 PRKCAP17252 672 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms