RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 EEF2KO00418 725 aaKnown RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 KIF3CO14782 793 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 THP07101 528 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 PGK2P07205 417 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 PDIA2Q13087 525 aaKnown RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 BYSLQ13895 437 aaKnown RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 TRADDQ15628 312 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 GRIK4Q16099 956 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 GOLGA7BQ2TAP0 167 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 ARHGAP15Q53QZ3 475 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 TDRD10Q5VZ19 366 aaKnown RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 SLC27A1Q6PCB7 646 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 RAD9BQ6WBX8 426 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 SH3RF1Q7Z6J0 888 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 MAP4K3Q8IVH8 894 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 CPA5Q8WXQ8 436 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 TSPAN17Q96FV3 270 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 TMEM169Q96HH4 297 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 MCEEQ96PE7 176 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 SH2D3AQ9BRG2 576 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 SLIT2O94813 1529 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 FAM86B1E9PN63 330 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 CASQ2O14958 399 aaPredicted RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 FAM86B2P0C5J1 330 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 ADORA2AP29274 412 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 EPM2AIP1Q7L775 607 aaPredicted RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 PLPPR4Q7Z2D5 763 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 ATPAF2Q8N5M1 289 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 MRPL9Q9BYD2 267 aaKnown RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 PRDM5Q9NQX1 630 aaPredicted RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 TPX2Q9ULW0 747 aaKnown RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 TRIM33Q9UPN9 1127 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 SCN11AQ9UI33 1791 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 PLIN4Q96Q06 1357 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 LYPLA2O95372 231 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 AGTP01019 485 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 MYCP01106 439 aaPredicted RBP12.57□□□□□ -0.4
PTPRF-205ENST00000414879 PSMD6Q15008 389 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 SLC30A10Q6XR72 485 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 ZBTB18Q99592 522 aa12.57□□□□□ -0.4
PTPRF-205ENST00000414879 INSRRP14616 1297 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 ETFBP38117 255 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 OR1G1P47890 313 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 CLCN3P51790 818 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 FHDC1Q9C0D6 1143 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-205ENST00000414879 DYRK4Q9NR20 520 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 RGPD5Q99666 1765 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 NCK2O43639 380 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 C1QBPQ07021 282 aaKnown RBP12.56□□□□□ -0.4
PTPRF-205ENST00000414879 ACVR2BQ13705 512 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 LINC00523Q86TU6 105 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 CBWD2Q8IUF1 395 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 MSL3Q8N5Y2 521 aaKnown RBP12.56□□□□□ -0.4
PTPRF-205ENST00000414879 GLIS2Q9BZE0 524 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-205ENST00000414879 SIK2Q9H0K1 926 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 STARD7Q9NQZ5 370 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 AIPL1Q9NZN9 384 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 DUOX1Q9NRD9 1551 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 PRRG1O14668 218 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 ONECUT3O60422 494 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-205ENST00000414879 SNX2O60749 519 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 CDH16O75309 829 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 PSMD10O75832 226 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 HSPA4LO95757 839 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 TFRCP02786 760 aaKnown RBP12.56□□□□□ -0.4
PTPRF-205ENST00000414879 HARS2P49590 506 aaKnown RBP12.56□□□□□ -0.4
PTPRF-205ENST00000414879 PPP2R2AP63151 447 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 BRSK2Q8IWQ3 736 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 SPON2Q9BUD6 331 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 CYP39A1Q9NYL5 469 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 VPS9D1Q9Y2B5 631 aa12.56□□□□□ -0.4
PTPRF-205ENST00000414879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.56□□□□□ -0.4
PTPRF-205ENST00000414879 RSPH10B2B2RC85 870 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 PAEPP09466 180 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 RSPH10BP0C881 870 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 COMTP21964 271 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 FDFT1P37268 417 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 SLCO1A2P46721 670 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 ST8SIA6P61647 398 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 MTF1Q14872 753 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 DRC3Q9H069 523 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 RRAGCQ9HB90 399 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 XAB2Q9HCS7 855 aaKnown RBP12.55□□□□□ -0.4
PTPRF-205ENST00000414879 ZNF212Q9UDV6 495 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 TBK1Q9UHD2 729 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 CPA4Q9UI42 421 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 FRA10AC1Q70Z53 315 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 CFAP61Q8NHU2 1237 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 ATP6V1G3Q96LB4 118 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 PITPNM3Q9BZ71 974 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 NDE1Q9NXR1 346 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 NRCAMQ92823 1304 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 NID2Q14112 1375 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 CCDC160A6NGH7 325 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 MOCS2O96007 188 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-205ENST00000414879 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms