RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 HNRNPDQ14103 355 aaKnown RBP17.31■□□□□ 0.36
CPNE1-208ENST00000414711 EPHA7Q15375 998 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 FAM187BQ17R55 369 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 ARHGAP15Q53QZ3 475 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 LARP1BQ659C4 914 aaKnown RBP17.31■□□□□ 0.36
CPNE1-208ENST00000414711 SLC39A7Q92504 469 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 CRELD1Q96HD1 420 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 DYDC2Q96IM9 177 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 FZD8Q9H461 694 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 GKN1Q9NS71 199 aa17.31■□□□□ 0.36
CPNE1-208ENST00000414711 ATXN2Q99700 1313 aaKnown RBP17.3■□□□□ 0.36
CPNE1-208ENST00000414711 PODXLO00592 558 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 TNFRSF10BO14763 440 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 IGHDP01880 384 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 WEE1P30291 646 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 AMPD2Q01433 879 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 PRPF4BQ13523 1007 aaKnown RBP17.3■□□□□ 0.36
CPNE1-208ENST00000414711 CDCA2Q69YH5 1023 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-208ENST00000414711 TRIM68Q6AZZ1 485 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 PPP4R3AQ6IN85 833 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 ANO7Q6IWH7 933 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 SLC23A3Q6PIS1 610 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 ARMCX6Q7L4S7 300 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 SYT12Q8IV01 421 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 ZBTB8OSQ8IWT0 167 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 DAGLBQ8NCG7 672 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 FAM20AQ96MK3 541 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 P2RY13Q9BPV8 354 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 FAM83CQ9BQN1 747 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 GTPBP2Q9BX10 602 aaKnown RBP17.3■□□□□ 0.36
CPNE1-208ENST00000414711 SMG9Q9H0W8 520 aaKnown RBP17.3■□□□□ 0.36
CPNE1-208ENST00000414711 EBF3Q9H4W6 596 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 KCNMB3Q9NPA1 279 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 TMEM74BQ9NUR3 256 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 RAI2Q9Y5P3 530 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 CFAP46Q8IYW2 2715 aa17.3■□□□□ 0.36
CPNE1-208ENST00000414711 URB1O60287 2271 aaKnown RBP17.3■□□□□ 0.36
CPNE1-208ENST00000414711 KIAA1549LQ6ZVL6 1849 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 OPHN1O60890 802 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 FGF19O95750 216 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 CFIP05156 583 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 U2AF2P26368 475 aaKnown RBP eCLIP17.29■□□□□ 0.363e-26■□□□□ 9.9
CPNE1-208ENST00000414711 GABRR2P28476 465 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 GALK1P51570 392 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 NLRP5P59047 1200 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 EXOSC10Q01780 885 aaKnown RBP17.29■□□□□ 0.36
CPNE1-208ENST00000414711 NECTIN1Q15223 517 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 MAPK6Q16659 721 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 DCAF4L1Q3SXM0 396 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 NAIF1Q69YI7 327 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-208ENST00000414711 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 LPCAT2Q7L5N7 544 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 ZNF605Q86T29 641 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 RASSF3Q86WH2 238 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 BEST2Q8NFU1 509 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
CPNE1-208ENST00000414711 CCDC43Q96MW1 224 aaKnown RBP17.29■□□□□ 0.36
CPNE1-208ENST00000414711 FSCN3Q9NQT6 498 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 NUB1Q9Y5A7 615 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 UNC79Q9P2D8 2635 aa17.29■□□□□ 0.36
CPNE1-208ENST00000414711 TNRC6BQ9UPQ9 1833 aaKnown RBP17.28■□□□□ 0.36
CPNE1-208ENST00000414711 SMIM28A0A1B0GU29 152 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 VNN2O95498 520 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 FTH1P19P0C7X4 201 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 PSMD2Q13200 908 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 EEF1DP3Q658K8 133 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 DHX32Q7L7V1 743 aaKnown RBP17.28■□□□□ 0.36
CPNE1-208ENST00000414711 LURAP1LQ8IV03 231 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 TPH2Q8IWU9 490 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 EZH1Q92800 747 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-208ENST00000414711 EXOC4Q96A65 974 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 PGLYRP2Q96PD5 576 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 CRISPLD1Q9H336 500 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 TASP1Q9H6P5 420 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 PCDHA4Q9UN74 947 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 USP20Q9Y2K6 914 aa17.28■□□□□ 0.36
CPNE1-208ENST00000414711 PLXNB3Q9ULL4 1909 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 MYO18BQ8IUG5 2567 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 DPP6P42658 865 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 PTGER3P43115 390 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 ALDH1A3P47895 512 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 CYP4F8P98187 520 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 TRIP6Q15654 476 aaKnown RBP17.27■□□□□ 0.36
CPNE1-208ENST00000414711 PNPLA1Q8N8W4 532 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 APPL2Q8NEU8 664 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 MDGA1Q8NFP4 955 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 PSMG2Q969U7 264 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 SUSD3Q96L08 255 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 RNF26Q9BY78 433 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-208ENST00000414711 GPRC5CQ9NQ84 441 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 SH3GLB2Q9NR46 395 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 SLC38A7Q9NVC3 462 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 DKK4Q9UBT3 224 aa17.27■□□□□ 0.36
CPNE1-208ENST00000414711 NID2Q14112 1375 aa17.27■□□□□ 0.35
CPNE1-208ENST00000414711 PI4KAP42356 2102 aa17.26■□□□□ 0.35
CPNE1-208ENST00000414711 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.26■□□□□ 0.35
CPNE1-208ENST00000414711 ATXN7O15265 892 aaPredicted RBP17.26■□□□□ 0.35
CPNE1-208ENST00000414711 MARCH6O60337 910 aa17.26■□□□□ 0.35
CPNE1-208ENST00000414711 USO1O60763 962 aaKnown RBP17.26■□□□□ 0.35
CPNE1-208ENST00000414711 EDN1P05305 212 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms