RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 GLB1LQ6UWU2 654 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 C16orf59Q7L2K0 433 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 ZNF280BQ86YH2 543 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 TMEM199Q8N511 208 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 C3orf58Q8NDZ4 430 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 BADQ92934 168 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 NIF3L1Q9GZT8 377 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 UBN1Q9NPG3 1134 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 AIPL1Q9NZN9 384 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 HCSTQ9UBK5 93 aa16.62■□□□□ 0.25
SHMT2-202ENST00000414700 CDH23Q9H251 3354 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 PTPRSQ13332 1948 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 XPOTO43592 962 aaKnown RBP16.61■□□□□ 0.25
SHMT2-202ENST00000414700 CYP3A5P20815 502 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 USP8P40818 1118 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 CDH8P55286 799 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 SMC1AQ14683 1233 aaKnown RBP16.61■□□□□ 0.25
SHMT2-202ENST00000414700 ZNF667Q5HYK9 610 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 CC2D1AQ6P1N0 951 aaPredicted RBP16.61■□□□□ 0.25
SHMT2-202ENST00000414700 RAD9BQ6WBX8 426 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 EXOC4Q96A65 974 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 SDCBP2Q9H190 292 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 ELAC1Q9H777 363 aaKnown RBP16.61■□□□□ 0.25
SHMT2-202ENST00000414700 SMYD3Q9H7B4 428 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 VRTNQ9H8Y1 702 aa16.61■□□□□ 0.25
SHMT2-202ENST00000414700 CCDC85CA6NKD9 419 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 F8W810 466 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 INPPL1O15357 1258 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 DDHD2O94830 711 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 CD58P19256 250 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 ACO1P21399 889 aaKnown RBP16.6■□□□□ 0.25
SHMT2-202ENST00000414700 STAT1P42224 750 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 DEFB103AP81534 67 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 OTOP2Q7RTS6 562 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 TSPAN18Q96SJ8 248 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 SLC38A7Q9NVC3 462 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 TBC1D13Q9NVG8 400 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 PRKAG2Q9UGJ0 569 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 MYO6Q9UM54 1294 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 CYP26A1O43174 497 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 SASH3O75995 380 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 LRPAP1P30533 357 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 ATICP31939 592 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 EPHB4P54760 987 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 GRIK3Q13003 919 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 ASIC2Q16515 512 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 TSR1Q2NL82 804 aaKnown RBP16.6■□□□□ 0.25
SHMT2-202ENST00000414700 PAN2Q504Q3 1202 aaKnown RBP16.6■□□□□ 0.25
SHMT2-202ENST00000414700 NOMO2Q5JPE7 1267 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 FAM71AQ8IYT1 594 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 TAF4BQ92750 862 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 SYN2Q92777 582 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-202ENST00000414700 NUCKS1Q9H1E3 243 aaKnown RBP16.6■□□□□ 0.25
SHMT2-202ENST00000414700 HAUS4Q9H6D7 363 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 LRFN2Q9ULH4 789 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 SNX9Q9Y5X1 595 aa16.6■□□□□ 0.25
SHMT2-202ENST00000414700 LILRA4P59901 499 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 PTK2Q05397 1052 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 MYO1EQ12965 1108 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 UPP1Q16831 310 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 TDRD12Q587J7 1177 aaKnown RBP16.59■□□□□ 0.25
SHMT2-202ENST00000414700 CYP26C1Q6V0L0 522 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 LRRC52Q8N7C0 313 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 CASD1Q96PB1 797 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 MMS19Q96T76 1030 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 BCO2Q9BYV7 579 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 NHEJ1Q9H9Q4 299 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-202ENST00000414700 CISHQ9NSE2 258 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 ZNHIT6Q9NWK9 470 aaKnown RBP16.59■□□□□ 0.25
SHMT2-202ENST00000414700 DNAJB4Q9UDY4 337 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 ZMYND8Q9ULU4 1186 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-202ENST00000414700 COL4A6Q14031 1691 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 TNRC18O15417 2968 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-202ENST00000414700 CHD7Q9P2D1 2997 aa16.59■□□□□ 0.25
SHMT2-202ENST00000414700 PODXLO00592 558 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 KRT5P13647 590 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 TBXAS1P24557 533 aaPredicted RBP16.58■□□□□ 0.25
SHMT2-202ENST00000414700 KLHL30Q0D2K2 578 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 ZNF394Q53GI3 561 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 TMEM270Q6UE05 265 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 TOGARAM2Q6ZUX3 1019 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 ENOSF1Q7L5Y1 443 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 SRLQ86TD4 932 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 SLC47A2Q86VL8 602 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 C10orf67Q8IYJ2 551 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 GPR161Q8N6U8 529 aaKnown RBP16.58■□□□□ 0.25
SHMT2-202ENST00000414700 UBR7Q8N806 425 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 HASPINQ8TF76 798 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 CARD6Q9BX69 1037 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 IL23AQ9NPF7 189 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 DAAM1Q9Y4D1 1078 aa16.58■□□□□ 0.25
SHMT2-202ENST00000414700 KPNA7A9QM74 516 aa16.58■□□□□ 0.24
SHMT2-202ENST00000414700 URI1O94763 535 aaPredicted RBP16.58■□□□□ 0.24
SHMT2-202ENST00000414700 STAU1O95793 577 aaKnown RBP16.58■□□□□ 0.24
SHMT2-202ENST00000414700 ITGB1P05556 798 aa16.58■□□□□ 0.24
SHMT2-202ENST00000414700 EIF4A3P38919 411 aaKnown RBP16.58■□□□□ 0.24
SHMT2-202ENST00000414700 WDR5P61964 334 aaKnown RBP16.58■□□□□ 0.24
SHMT2-202ENST00000414700 TUSC3Q13454 348 aa16.58■□□□□ 0.24
SHMT2-202ENST00000414700 FAM117BQ6P1L5 589 aa16.58■□□□□ 0.24
SHMT2-202ENST00000414700 ZNF571Q7Z3V5 609 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms