RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 RC3H2Q9HBD1 1191 aaKnown RBP10.68□□□□□ -0.7
DDB1-202ENST00000414411 ST7Q9NRC1 585 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 PCDHA13Q9Y5I0 950 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 TDRD15B5MCY1 1934 aaKnown RBP10.68□□□□□ -0.7
DDB1-202ENST00000414411 COL4A6Q14031 1691 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 SSU72P8A0A1W2PR75 194 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 MACROD2A1Z1Q3 448 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 AKR1B10O60218 316 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 TNNI1P19237 187 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 AP3M2P53677 418 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 DUOXA2Q1HG44 320 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 ASTE1Q2TB18 679 aaPredicted RBP10.68□□□□□ -0.7
DDB1-202ENST00000414411 ZACNQ401N2 412 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 DCAF17Q5H9S7 520 aaPredicted RBP10.68□□□□□ -0.7
DDB1-202ENST00000414411 GLRA4Q5JXX5 417 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 C9orf50Q5SZB4 431 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 HGSNATQ68CP4 663 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 LMBRD2Q68DH5 695 aaPredicted RBP10.68□□□□□ -0.7
DDB1-202ENST00000414411 GLB1LQ6UWU2 654 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 SV2AQ7L0J3 742 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 RSPH1Q8WYR4 309 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 SYN2Q92777 582 aaPredicted RBP10.68□□□□□ -0.7
DDB1-202ENST00000414411 ZNF689Q96CS4 500 aaPredicted RBP10.68□□□□□ -0.7
DDB1-202ENST00000414411 UBXN6Q9BZV1 441 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 TMEM117Q9H0C3 514 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 NUCKS1Q9H1E3 243 aaKnown RBP10.68□□□□□ -0.7
DDB1-202ENST00000414411 KDM4CQ9H3R0 1056 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 LRFN2Q9ULH4 789 aa10.68□□□□□ -0.7
DDB1-202ENST00000414411 HOXA2O43364 376 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 UPP2O95045 317 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 AFPP02771 609 aaKnown RBP10.67□□□□□ -0.7
DDB1-202ENST00000414411 THP07101 528 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 TUBBP07437 444 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 RHOXF2BP0C7M4 288 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 IBSPP21815 317 aaPredicted RBP10.67□□□□□ -0.7
DDB1-202ENST00000414411 GCLMP48507 274 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 FMO5P49326 533 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 GATMP50440 423 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 SCNN1GP51170 649 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 SOX4Q06945 474 aaPredicted RBP10.67□□□□□ -0.7
DDB1-202ENST00000414411 TMEM132DQ14C87 1099 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 TERF2Q15554 542 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 CBWD6Q4V339 395 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 NOMO2Q5JPE7 1267 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 CBWD3Q5JTY5 395 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 CBWD5Q5RIA9 395 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 TCERG1LQ5VWI1 586 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 SCARA3Q6AZY7 606 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 TMCO2Q7Z6W1 182 aaPredicted RBP10.67□□□□□ -0.7
DDB1-202ENST00000414411 TRIM58Q8NG06 486 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 PHOSPHO2Q8TCD6 241 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 C18orf25Q96B23 403 aaPredicted RBP10.67□□□□□ -0.7
DDB1-202ENST00000414411 RHOXF2Q9BQY4 288 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 LSM14BQ9BX40 385 aaKnown RBP10.67□□□□□ -0.7
DDB1-202ENST00000414411 TMEM8AQ9HCN3 771 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 CHD7Q9P2D1 2997 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 KANSL3Q9P2N6 904 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 COQ4Q9Y3A0 265 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 CAPN6Q9Y6Q1 641 aa10.67□□□□□ -0.7
DDB1-202ENST00000414411 ZBBXA8MT70 800 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 PJA2O43164 708 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 SRGAP2O75044 1071 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 ERLIN1O75477 346 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 GJB5O95377 273 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 POMCP01189 267 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 CYP3A5P20815 502 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 HTRA4P83105 476 aaPredicted RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 TFAMQ00059 246 aaKnown RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 CKAP4Q07065 602 aaKnown RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 DSC1Q08554 894 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 SHHQ15465 462 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 BEND6Q5SZJ8 279 aaPredicted RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 TDRD10Q5VZ19 366 aaKnown RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 KRT39Q6A163 491 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 TMEM130Q8N3G9 435 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 C1orf127Q8N9H9 656 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 RPGRIP1Q96KN7 1286 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 MMS19Q96T76 1030 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 MTMR12Q9C0I1 747 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 NLRC4Q9NPP4 1024 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 SLC38A7Q9NVC3 462 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 TBC1D13Q9NVG8 400 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 DPP3Q9NY33 737 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 UBQLN1Q9UMX0 589 aaKnown RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 JRKLQ9Y4A0 524 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 SLC4A7Q9Y6M7 1214 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 SCN1AP35498 2009 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 GTPBP10A4D1E9 387 aaKnown RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 MAP2K7O14733 419 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 P4HA2O15460 535 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 B4GALT3O60512 393 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 TACC1O75410 805 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 VNN1O95497 513 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 CST3P01034 146 aaPredicted RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 SERPING1P05155 500 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 LRPAP1P30533 357 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 BMP8BP34820 402 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 POLR2FP61218 127 aaKnown RBP10.66□□□□□ -0.7
DDB1-202ENST00000414411 VSNL1P62760 191 aa10.66□□□□□ -0.7
DDB1-202ENST00000414411 GRIK3Q13003 919 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms