RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 MFSD7Q6UXD7 560 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 RCOR2Q8IZ40 523 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 REPS2Q8NFH8 660 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 ZNF526Q8TF50 670 aaPredicted RBP15.85■□□□□ 0.13
TTC39A-208ENST00000413473 MAML1Q92585 1016 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 TBC1D31Q96DN5 1066 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 PRKAG3Q9UGI9 489 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 IP6K2Q9UHH9 426 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 KCNG1Q9UIX4 513 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.85■□□□□ 0.13
TTC39A-208ENST00000413473 HGSO14964 777 aaPredicted RBP15.85■□□□□ 0.13
TTC39A-208ENST00000413473 SUPT20HL2P0C7V6 817 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 ETS1P14921 441 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 NQO1P15559 274 aaKnown RBP15.85■□□□□ 0.13
TTC39A-208ENST00000413473 KCNA3P22001 575 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 FOXN2P32314 431 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 BACE1P56817 501 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 SP2Q02086 613 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 LMNB2Q03252 620 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 BNIP1Q12981 228 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 TNFAIP1Q13829 316 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 SUPT20HL1Q3ZLR7 823 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 SLFN12LQ6IEE8 588 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 CGB2Q6NT52 195 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 ANKRD35Q8N283 1001 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 DEPTORQ8TB45 409 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 CDHR1Q96JP9 859 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 PAIP2Q9BPZ3 127 aaKnown RBP15.85■□□□□ 0.13
TTC39A-208ENST00000413473 PNMA3Q9UL41 463 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 CNTN6Q9UQ52 1028 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 ACTL7BQ9Y614 415 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 IVNS1ABPQ9Y6Y0 642 aa15.85■□□□□ 0.13
TTC39A-208ENST00000413473 EXOC1LA0A1B0GW35 172 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 SPATA31C2B4DYI2 1134 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 HARSP12081 509 aaKnown RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 TAC1P20366 129 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 MMP8P22894 467 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 TBXAS1P24557 533 aaPredicted RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 COPS2P61201 443 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 MKRN3Q13064 507 aaKnown RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 NCOA4Q13772 614 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 NEDD9Q14511 834 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 CIAPIN1Q6FI81 312 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 PPP1R21Q6ZMI0 780 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 GBP7Q8N8V2 638 aaPredicted RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 RMDN2Q96LZ7 410 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 SLITRK1Q96PX8 696 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 CGRRF1Q99675 332 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 PORCNQ9H237 461 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 GINM1Q9NU53 330 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 ZNF214Q9UL59 606 aaPredicted RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 CNTNAP2Q9UHC6 1331 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 A0A0B4J269 797 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 TMEM191CA6NGB0 347 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 F8VP50 259 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 DNALI1O14645 258 aaPredicted RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 SPAG7O75391 227 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 LDHAP00338 332 aaKnown RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 EDN1P05305 212 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 TMEM191BP0C7N4 346 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 EZRP15311 586 aaKnown RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 ARSEP51690 589 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 WDR4P57081 412 aaKnown RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 IRX3P78415 501 aaPredicted RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 CFAP57Q96MR6 1250 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 FOXP3Q9BZS1 431 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 GEMIN8Q9NWZ8 242 aaKnown RBP15.84■□□□□ 0.13
TTC39A-208ENST00000413473 CYP39A1Q9NYL5 469 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 MCM8Q9UJA3 840 aa15.84■□□□□ 0.13
TTC39A-208ENST00000413473 FAM47DPA6NHR8 397 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 IGF2BP3O00425 579 aaKnown RBP eCLIP15.83■□□□□ 0.13
TTC39A-208ENST00000413473 TJP3O95049 919 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 CST3P01034 146 aaPredicted RBP15.83■□□□□ 0.13
TTC39A-208ENST00000413473 KRT1P04264 644 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 ABHD2P08910 425 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 GCAP28676 217 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 GPS1Q13098 491 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 RIPK1Q13546 671 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 ZNF268Q14587 947 aaPredicted RBP15.83■□□□□ 0.13
TTC39A-208ENST00000413473 FASTKD3Q14CZ7 662 aaKnown RBP15.83■□□□□ 0.13
TTC39A-208ENST00000413473 TMEM132BQ14DG7 1078 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 MTFR1Q15390 333 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 GNPTABQ3T906 1256 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 NBPF12Q5TAG4 269 aaPredicted RBP15.83■□□□□ 0.13
TTC39A-208ENST00000413473 FAM47EQ6ZV65 393 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 KIF2BQ8N4N8 673 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 ACSF2Q96CM8 615 aaPredicted RBP15.83■□□□□ 0.13
TTC39A-208ENST00000413473 KLHL29Q96CT2 875 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 RBM41Q96IZ5 413 aaKnown RBP15.83■□□□□ 0.13
TTC39A-208ENST00000413473 PLCD4Q9BRC7 762 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 PITPNM3Q9BZ71 974 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 RXFP1Q9HBX9 757 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 KLHL14Q9P2G3 628 aa15.83■□□□□ 0.13
TTC39A-208ENST00000413473 POC1B-GALNT4F8VUJ3 575 aa15.83■□□□□ 0.12
TTC39A-208ENST00000413473 PIGRP01833 764 aa15.83■□□□□ 0.12
TTC39A-208ENST00000413473 PECAM1P16284 738 aaPredicted RBP15.83■□□□□ 0.12
TTC39A-208ENST00000413473 NAMPTP43490 491 aa15.83■□□□□ 0.12
TTC39A-208ENST00000413473 MGAT5Q09328 741 aa15.83■□□□□ 0.12
TTC39A-208ENST00000413473 ZNF252P-AS1Q0IIN9 211 aa15.83■□□□□ 0.12
TTC39A-208ENST00000413473 TXNRD3NBQ6F5E7 133 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms