RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 FAM189A1O60320 539 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 HBP1O60381 514 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 ANP32DO95626 131 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 PRKCBP05771 671 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 HARSP12081 509 aaKnown RBP13.82□□□□□ -0.2
LITAF-203ENST00000413364 LSP1P33241 339 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 NNTQ13423 1086 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 MAPK6Q16659 721 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 TMEM63BQ5T3F8 832 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 ZNF677Q86XU0 584 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 ZNF653Q96CK0 615 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 DNAAF2Q9NVR5 837 aaKnown RBP13.82□□□□□ -0.2
LITAF-203ENST00000413364 UVRAGQ9P2Y5 699 aa13.82□□□□□ -0.2
LITAF-203ENST00000413364 CETPP11597 493 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 ACO1P21399 889 aaKnown RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 CARSP49589 748 aaKnown RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 AP3M2P53677 418 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 CUL2Q13617 745 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 CLUL1Q15846 466 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 ZNF792Q3KQV3 632 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 OR5B17Q8NGF7 314 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 NUP85Q9BW27 656 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 YIPF2Q9BWQ6 316 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 SLITRK6Q9H5Y7 841 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 APOBEC3GQ9HC16 384 aaKnown RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 MCM3APO60318 1980 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 ZNFX1Q9P2E3 1918 aaKnown RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 PDHXO00330 501 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 OGTO15294 1046 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 SART1O43290 800 aaKnown RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 ITGA4P13612 1032 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 MCL1Q07820 350 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 ARHGAP1Q07960 439 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 PDCLQ13371 301 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 TFDP1Q14186 410 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 SEZ6Q53EL9 994 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 ANKRD20A8PQ5CZ79 823 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 ALS2CLQ60I27 953 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 KDM7AQ6ZMT4 941 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 ZBTB33Q86T24 672 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 EIF1ADQ8N9N8 165 aaKnown RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 TRAPPC12Q8WVT3 735 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 CASKIN2Q8WXE0 1202 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 ALG3Q92685 438 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 STAMBPL1Q96FJ0 436 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 MS4A4AQ96JQ5 239 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 RNPC3Q96LT9 517 aaKnown RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 NAP1L3Q99457 506 aaPredicted RBP13.81□□□□□ -0.2
LITAF-203ENST00000413364 TCHPQ9BT92 498 aa13.81□□□□□ -0.2
LITAF-203ENST00000413364 ESYT3A0FGR9 886 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 LRRD1A4D1F6 860 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 TMEM110-MUSTN1A8MSY1 372 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 CALCAP01258 141 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 FGGP02679 453 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 CLTAP09496 248 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 GHRP10912 638 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 COMTP21964 271 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 PAX3P23760 479 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 TBXAS1P24557 533 aaPredicted RBP13.8□□□□□ -0.2
LITAF-203ENST00000413364 TNFSF9P41273 254 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 CTCFP49711 727 aaPredicted RBP13.8□□□□□ -0.2
LITAF-203ENST00000413364 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 MESDQ14696 234 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 NLRP14Q86W24 1093 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 RHPN2Q8IUC4 686 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 WDR49Q8IV35 697 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 UBL4BQ8N7F7 174 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 ZNF564Q8TBZ8 553 aaPredicted RBP13.8□□□□□ -0.2
LITAF-203ENST00000413364 IFT81Q8WYA0 676 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 CCT8L2Q96SF2 557 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 RUFY1Q96T51 708 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 ZSWIM1Q9BR11 485 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 ZNF408Q9H9D4 720 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 ERAP1Q9NZ08 941 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 CHORDC1Q9UHD1 332 aaPredicted RBP13.8□□□□□ -0.2
LITAF-203ENST00000413364 NFU1Q9UMS0 254 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 CNTN6Q9UQ52 1028 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 BTBD19C9JJ37 291 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 BHMG1C9JSJ3 638 aaPredicted RBP13.8□□□□□ -0.2
LITAF-203ENST00000413364 UNGP13051 313 aaPredicted RBP13.8□□□□□ -0.2
LITAF-203ENST00000413364 ADORA2AP29274 412 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 GTF2A2P52657 109 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 NOP14P78316 857 aaKnown RBP13.8□□□□□ -0.2
LITAF-203ENST00000413364 NCOA4Q13772 614 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 TAPT1Q6NXT6 567 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 ABRAQ8N0Z2 381 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 GBP7Q8N8V2 638 aaPredicted RBP13.8□□□□□ -0.2
LITAF-203ENST00000413364 MYCBPAPQ8TBZ2 947 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.8□□□□□ -0.2
LITAF-203ENST00000413364 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
LITAF-203ENST00000413364 WNT8AQ9H1J5 351 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 FZD8Q9H461 694 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 VTA1Q9NP79 307 aa13.8□□□□□ -0.2
LITAF-203ENST00000413364 SRCAPQ6ZRS2 3230 aa13.79□□□□□ -0.2
LITAF-203ENST00000413364 ACKR2O00590 384 aa13.79□□□□□ -0.2
LITAF-203ENST00000413364 ASAP2O43150 1006 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms