RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 EPHB2P29323 1055 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 MCL1Q07820 350 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 DMP1Q13316 513 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-202ENST00000413219 MAMLD1Q13495 774 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 C11orf91Q3C1V1 193 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 ANO7Q6IWH7 933 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 SLC39A4Q6P5W5 647 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 NLRP9Q7RTR0 991 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 OTOAQ7RTW8 1153 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 PHF13Q86YI8 300 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-202ENST00000413219 GPD1LQ8N335 351 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 C8orf37Q96NL8 207 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 NTPCRQ9BSD7 190 aaKnown RBP18.63■□□□□ 0.57
SDCBP-202ENST00000413219 ZFP69BQ9UJL9 534 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 FEM1BQ9UK73 627 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 DENND3A2RUS2 1198 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 ECE2O60344 883 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 TJP3O95049 919 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 CALCAP01258 141 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 TROVE2P10155 538 aaKnown RBP eCLIP18.62■□□□□ 0.57
SDCBP-202ENST00000413219 GARTP22102 1010 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 PSMC5P62195 406 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 SPP2Q13103 211 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 LBRQ14739 615 aaKnown RBP18.62■□□□□ 0.57
SDCBP-202ENST00000413219 EFHC2Q5JST6 749 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 ZNF449Q6P9G9 518 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 CENPUQ71F23 418 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 C4orf33Q8N1A6 199 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 POMGNT1Q8WZA1 660 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 TDRD3Q9H7E2 651 aaKnown RBP18.62■□□□□ 0.57
SDCBP-202ENST00000413219 VPS37BQ9H9H4 285 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 KIF9Q9HAQ2 790 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 C17orf75Q9HAS0 396 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 ZMYND8Q9ULU4 1186 aaPredicted RBP18.62■□□□□ 0.57
SDCBP-202ENST00000413219 CD58P19256 250 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 PCK1P35558 622 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 ARSEP51690 589 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 NOMO3P69849 1222 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 GHRHRQ02643 423 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
SDCBP-202ENST00000413219 SGSM1Q2NKQ1 1148 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 TAF1BQ53T94 588 aaPredicted RBP18.62■□□□□ 0.57
SDCBP-202ENST00000413219 XKR9Q5GH70 373 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 CC2D2BQ6DHV5 1058 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 LLGL2Q6P1M3 1020 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 PHLDB2Q86SQ0 1253 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 PI4K2AQ9BTU6 479 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 FHDC1Q9C0D6 1143 aaPredicted RBP18.62■□□□□ 0.57
SDCBP-202ENST00000413219 DENND2DQ9H6A0 471 aaPredicted RBP18.62■□□□□ 0.57
SDCBP-202ENST00000413219 KMT5AQ9NQR1 393 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 IP6K2Q9UHH9 426 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 DNPEPQ9ULA0 475 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 ZNF148Q9UQR1 794 aa18.62■□□□□ 0.57
SDCBP-202ENST00000413219 CBX6O95503 412 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 PTPN7P35236 360 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 PTDSS1P48651 473 aaKnown RBP18.61■□□□□ 0.57
SDCBP-202ENST00000413219 JAK3P52333 1124 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 UGCGQ16739 394 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 WDR44Q5JSH3 913 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 RNASEH2BQ5TBB1 312 aaKnown RBP18.61■□□□□ 0.57
SDCBP-202ENST00000413219 LRRC38Q5VT99 294 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 DAB2IPQ5VWQ8 1189 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 LVRNQ6Q4G3 990 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 IL31RAQ8NI17 732 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 SLITRK1Q96PX8 696 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 C11orf70Q9BRQ4 267 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 ANKFY1Q9P2R3 1169 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 ZBTB21Q9ULJ3 1066 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 ATP4AP20648 1035 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 DSG3P32926 999 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 CLDN10P78369 228 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 GPS1Q13098 491 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 FASTKD3Q14CZ7 662 aaKnown RBP18.61■□□□□ 0.57
SDCBP-202ENST00000413219 CTC1Q2NKJ3 1217 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 TRIM68Q6AZZ1 485 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 CLNKQ7Z7G1 428 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 ABRAQ8N0Z2 381 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 SAMD3Q8N6K7 520 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 RBBP8NLQ8NC74 664 aaPredicted RBP18.61■□□□□ 0.57
SDCBP-202ENST00000413219 FEZF2Q8TBJ5 459 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 DNAJC9Q8WXX5 260 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 COL20A1Q9P218 1284 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 STOML1Q9UBI4 398 aa18.61■□□□□ 0.57
SDCBP-202ENST00000413219 ZNF646O15015 1829 aaPredicted RBP18.6■□□□□ 0.57
SDCBP-202ENST00000413219 TLR3O15455 904 aaKnown RBP18.6■□□□□ 0.57
SDCBP-202ENST00000413219 NPTXRO95502 500 aa18.6■□□□□ 0.57
SDCBP-202ENST00000413219 SFNP31947 248 aa18.6■□□□□ 0.57
SDCBP-202ENST00000413219 GEMIN4P57678 1058 aaKnown RBP18.6■□□□□ 0.57
SDCBP-202ENST00000413219 MTMR1Q13613 665 aa18.6■□□□□ 0.57
SDCBP-202ENST00000413219 GLIS1Q8NBF1 620 aa18.6■□□□□ 0.57
SDCBP-202ENST00000413219 NKD2Q969F2 451 aaPredicted RBP18.6■□□□□ 0.57
SDCBP-202ENST00000413219 SENP7Q9BQF6 1050 aa18.6■□□□□ 0.57
SDCBP-202ENST00000413219 MAK16Q9BXY0 300 aaKnown RBP18.6■□□□□ 0.57
SDCBP-202ENST00000413219 PCDH9Q9HC56 1237 aa18.6■□□□□ 0.57
SDCBP-202ENST00000413219 PARVAQ9NVD7 372 aa18.6■□□□□ 0.57
SDCBP-202ENST00000413219 TMEM150BA6NC51 233 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 TM9SF1O15321 606 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 CCDC22O60826 627 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 ICAM1P05362 532 aa18.59■□□□□ 0.57
SDCBP-202ENST00000413219 ACO1P21399 889 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms