RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 TCTN1Q2MV58 587 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 ARHGAP29Q52LW3 1261 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 C10orf76Q5T2E6 689 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 TAF3Q5VWG9 929 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 SLC24A5Q71RS6 500 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 RTN4RL1Q86UN2 441 aaPredicted RBP7.11□□□□□ -1.27
VPS41-204ENST00000413141 ZNF677Q86XU0 584 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 PALB2Q86YC2 1186 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 RPUSD2Q8IZ73 545 aaKnown RBP7.11□□□□□ -1.27
VPS41-204ENST00000413141 TXLNBQ8N3L3 684 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 DBF4BQ8NFT6 615 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 DDX1Q92499 740 aaKnown RBP7.11□□□□□ -1.27
VPS41-204ENST00000413141 SEPT8Q92599 483 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 SCLYQ96I15 445 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 TMEM106CQ9BVX2 250 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 PACSIN1Q9BY11 444 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 TSGA10Q9BZW7 698 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 MCOLN1Q9GZU1 580 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 LACRTQ9GZZ8 138 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 FAM124BQ9H5Z6 455 aaPredicted RBP7.11□□□□□ -1.27
VPS41-204ENST00000413141 CYP3A43Q9HB55 503 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 LUC7LQ9NQ29 371 aaKnown RBP7.11□□□□□ -1.27
VPS41-204ENST00000413141 PRDM10Q9NQV6 1147 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 SEPT11Q9NVA2 429 aaKnown RBP7.11□□□□□ -1.27
VPS41-204ENST00000413141 TRIM10Q9UDY6 481 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 HMGXB4Q9UGU5 601 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 TFR2Q9UP52 801 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 SCN1AP35498 2009 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 TDRD15B5MCY1 1934 aaKnown RBP7.1□□□□□ -1.27
VPS41-204ENST00000413141 KIF2AO00139 706 aaPredicted RBP7.1□□□□□ -1.27
VPS41-204ENST00000413141 PODXLO00592 558 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 SPTLC1O15269 473 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 KRT86O43790 486 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 CILPO75339 1184 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 EOMESO95936 686 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 ABL1P00519 1130 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 POMCP01189 267 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 TNFAIP3P21580 790 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 CYP2C18P33260 490 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 RFC2P35250 354 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 MAGEA1P43355 309 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 CDH8P55286 799 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 BPIFB4P59827 614 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 FAM189BP81408 668 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 KIF5AQ12840 1032 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 SV2CQ496J9 727 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 CLLU1OSQ5K130 101 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 CCDC122Q5T0U0 273 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 ALKBH5Q6P6C2 394 aaKnown RBP7.1□□□□□ -1.27
VPS41-204ENST00000413141 GLB1LQ6UWU2 654 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 NECAB2Q7Z6G3 386 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 UBE2Q1Q7Z7E8 422 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 TTC39CQ8N584 583 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 WHAMMQ8TF30 809 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 TWNKQ96RR1 684 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 MMS19Q96T76 1030 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 PCDHB18PQ96TA0 734 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 ELAC1Q9H777 363 aaKnown RBP7.1□□□□□ -1.27
VPS41-204ENST00000413141 TMEM39AQ9NV64 488 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 TMEM161AQ9NX61 479 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 MIOSQ9NXC5 875 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 GDAP2Q9NXN4 497 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 TAS2R14Q9NYV8 317 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 CACNG4Q9UBN1 327 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 INPP5FQ9Y2H2 1132 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 SNX9Q9Y5X1 595 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 MICAL3Q7RTP6 2002 aa7.1□□□□□ -1.27
VPS41-204ENST00000413141 COL4A6Q14031 1691 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 NCANO14594 1321 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.09□□□□□ -1.27
VPS41-204ENST00000413141 CASTOR2A6NHX0 329 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 BTNL10A8MVZ5 291 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 KPNA7A9QM74 516 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 ENPP3O14638 875 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 FANCGO15287 622 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 THAP12O43422 761 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 KIF5CO60282 957 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 TACC1O75410 805 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 TUBB4AP04350 444 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 PAEPP09466 180 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 TMEM253P0C7T8 217 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 FGFR1P11362 822 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 GZMAP12544 262 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 TNNT1P13805 278 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 BRD2P25440 801 aaKnown RBP7.09□□□□□ -1.27
VPS41-204ENST00000413141 RPL9P32969 192 aaKnown RBP7.09□□□□□ -1.27
VPS41-204ENST00000413141 AARSP49588 968 aaKnown RBP eCLIP7.09□□□□□ -1.27
VPS41-204ENST00000413141 CLCNKBP51801 687 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 NDST1P52848 882 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 RAD23BP54727 409 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 LILRA4P59901 499 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 ETF1P62495 437 aaKnown RBP7.09□□□□□ -1.27
VPS41-204ENST00000413141 CENPCQ03188 943 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 ORC1Q13415 861 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 TUSC3Q13454 348 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 UPP1Q16831 310 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 CLEC16AQ2KHT3 1053 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 SOWAHAQ2M3V2 549 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 ZNF394Q53GI3 561 aa7.09□□□□□ -1.27
VPS41-204ENST00000413141 DNTTIP2Q5QJE6 756 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms