RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 CPSF3Q9UKF6 684 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 WDR90Q96KV7 1748 aa12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 O00370 1275 aa12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 LGR5O75473 907 aa12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 SLCO1A2P46721 670 aa12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 LMNB2Q03252 620 aa12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 AUHQ13825 339 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 TRIP13Q15645 432 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 UBAP2Q5T6F2 1119 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 CHMP6Q96FZ7 201 aa12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 SGIP1Q9BQI5 828 aa12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 CISHQ9NSE2 258 aa12.18□□□□□ -0.46
TRAFD1-202ENST00000412615 IGKV6-21A0A0C4DH24 114 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 A0A0G2JLL6 359 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 TTC4O95801 387 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 CD58P19256 250 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 GJC1P36383 396 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 TAP1Q03518 808 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 NFX1Q12986 1120 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 IFT88Q13099 833 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 CELF3Q5SZQ8 465 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 GKAP1Q5VSY0 366 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 C6orf89Q6UWU4 347 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 PRRT2Q7Z6L0 340 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 DCPSQ96C86 337 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 SERPINB12Q96P63 405 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 INTS9Q9NV88 658 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 NEU2Q9Y3R4 380 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 IRF6O14896 467 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 ACSL3O95573 720 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 ATP5DP30049 168 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 CHKAP35790 457 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 IREB2P48200 963 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 RPL7AP62424 266 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 TFDP1Q14186 410 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 HSDL1Q3SXM5 330 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 RNF187Q5TA31 235 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 LRRC38Q5VT99 294 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 SCARA3Q6AZY7 606 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 DNAJC24Q6P3W2 148 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 DCUN1D2Q6PH85 259 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 SULF1Q8IWU6 871 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 CACNA2D3Q8IZS8 1091 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 LRRC71Q8N4P6 559 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 CABS1Q96KC9 395 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 ASCC2Q9H1I8 757 aaPredicted RBP12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 ADAM7Q9H2U9 754 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 CEP83Q9Y592 693 aa12.17□□□□□ -0.46
TRAFD1-202ENST00000412615 ABLIM1O14639 778 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 ARIH2O95376 493 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 EIF4BP23588 611 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 SLC26A2P50443 739 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 TFAMQ00059 246 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 QPCTQ16769 361 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 ZFYVE27Q5T4F4 411 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 MPZL3Q6UWV2 235 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 TSHZ1Q6ZSZ6 1077 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 CEP128Q6ZU80 1094 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 CCDC125Q86Z20 511 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 CCHCR1Q8TD31 782 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 SEC16BQ96JE7 1060 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 DDX23Q9BUQ8 820 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 PCDHGC3Q9UN70 934 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 A0A0G2JMZ2 1700 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 ZBTB42B2RXF5 422 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 ACKR2O00590 384 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 SOCS7O14512 581 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 CXCL11O14625 94 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 CNMDO75829 334 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 TJP3O95049 919 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 GJB6O95452 261 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 TNNC2P02585 160 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 DRD4P21917 467 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 PIGHQ14442 188 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 PLCB4Q15147 1175 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 ZNF699Q32M78 642 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 ZNF394Q53GI3 561 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 DLK2Q6UY11 383 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 GSTA5Q7RTV2 222 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 ERICH1Q86X53 443 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 ATXN2LQ8WWM7 1075 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 OTUD5Q96G74 571 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 ANKRD36BP1Q96IX9 119 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 FOXP3Q9BZS1 431 aa12.16□□□□□ -0.46
TRAFD1-202ENST00000412615 TCRBV5S1A1TA0A578 114 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 B4GALT4O60513 344 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 PGK2P07205 417 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 PROZP22891 400 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 CDH5P33151 784 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 NF2P35240 595 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 VPS41P49754 854 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 COPS2P61201 443 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 KCTD2Q14681 263 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 LONRF1Q17RB8 773 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 ATF7IP2Q5U623 682 aa12.15□□□□□ -0.46
TRAFD1-202ENST00000412615 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms