RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CYP4F11Q9HBI6 524 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 INTS13Q9NVM9 706 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 AFF4Q9UHB7 1163 aaKnown RBP20.33■□□□□ 0.85
TRIM56-202ENST00000412507 ITGA11Q9UKX5 1188 aa20.33■□□□□ 0.85
TRIM56-202ENST00000412507 DENND4CQ5VZ89 1909 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 ARHGEF37A1IGU5 675 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 KPNA7A9QM74 516 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 PRRG1O14668 218 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 GPR37L1O60883 481 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 RHOBTB3O94955 611 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 CYP11A1P05108 521 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 ASGR2P07307 311 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 KRT19P08727 400 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 ZXDAP98168 799 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 PTPN21Q16825 1174 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 RTL10Q7L3V2 364 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 GET4Q7L5D6 327 aaPredicted RBP20.32■□□□□ 0.84
TRIM56-202ENST00000412507 TCEAL8Q8IYN2 117 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 CXorf38Q8TB03 319 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 EDAQ92838 391 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 MYADMQ96S97 322 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 LRFN3Q9BTN0 628 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 OXCT2Q9BYC2 517 aaPredicted RBP20.32■□□□□ 0.84
TRIM56-202ENST00000412507 KCTD10Q9H3F6 313 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 HCFC1R1Q9NWW0 138 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 SIX4Q9UIU6 781 aa20.32■□□□□ 0.84
TRIM56-202ENST00000412507 CIZ1Q9ULV3 898 aaPredicted RBP20.32■□□□□ 0.84
TRIM56-202ENST00000412507 OR6C75A6NL08 312 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 EXOC3O60645 756 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 TNNC2P02585 160 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 LRG1P02750 347 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 PNPLA4P41247 253 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 RBP5P82980 135 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 CYP24A1Q07973 514 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 BFSP1Q12934 665 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 SNW1Q13573 536 aaKnown RBP20.31■□□□□ 0.84
TRIM56-202ENST00000412507 ENGASEQ8NFI3 743 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 GOLGA5Q8TBA6 731 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 TMEM209Q96SK2 561 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 DNMT3BQ9UBC3 853 aaKnown RBP20.31■□□□□ 0.84
TRIM56-202ENST00000412507 DSEQ9UL01 958 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 INSL5Q9Y5Q6 135 aa20.31■□□□□ 0.84
TRIM56-202ENST00000412507 VNN2O95498 520 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 POU2F2P09086 479 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 DLATP10515 647 aaKnown RBP20.3■□□□□ 0.84
TRIM56-202ENST00000412507 FSHRP23945 695 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 FAM160A1Q05DH4 1040 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 GPR17Q13304 367 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 PNOCQ13519 176 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 MYBPC2Q14324 1141 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 KCNB1Q14721 858 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 PSMD6Q15008 389 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 DUOXA2Q1HG44 320 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 WSCD1Q658N2 575 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 METTL23Q86XA0 190 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 WDR49Q8IV35 697 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 LRRC52Q8N7C0 313 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 OR10T2Q8NGX3 314 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 CCDC127Q96BQ5 260 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 PGLYRP2Q96PD5 576 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 MAPK8IP1Q9UQF2 711 aa20.3■□□□□ 0.84
TRIM56-202ENST00000412507 ZNF638Q14966 1978 aaKnown RBP20.3■□□□□ 0.84
TRIM56-202ENST00000412507 PTPRDP23468 1912 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 PDXKO00764 312 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 TNNI1P19237 187 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 MFSD14AQ96MC6 490 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 FNBP1Q96RU3 617 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 CGRRF1Q99675 332 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 RTP3Q9BQQ7 232 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 DMAC2Q9NW81 257 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.29■□□□□ 0.844e-8■■□□□ 14.4
TRIM56-202ENST00000412507 MAFFQ9ULX9 164 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 SORCS3Q9UPU3 1222 aa20.29■□□□□ 0.84
TRIM56-202ENST00000412507 PABPC1LQ4VXU2 614 aaKnown RBP20.28■□□□□ 0.84
TRIM56-202ENST00000412507 TRIM67Q6ZTA4 783 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 TRAPPC11Q7Z392 1133 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 SLC9A9Q8IVB4 645 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 THEM5Q8N1Q8 247 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 ITFG1Q8TB96 612 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 GZF1Q9H116 711 aaPredicted RBP20.28■□□□□ 0.84
TRIM56-202ENST00000412507 CRISPLD1Q9H336 500 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 SMOC2Q9H3U7 446 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 EPS15L1Q9UBC2 864 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 R3HCC1Q9Y3T6 440 aaKnown RBP20.28■□□□□ 0.84
TRIM56-202ENST00000412507 OBSL1O75147 1896 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 MYH10P35580 1976 aa20.28■□□□□ 0.84
TRIM56-202ENST00000412507 MTMR11A4FU01 709 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 PRR33A8MZF0 331 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 CALUO43852 315 aaPredicted RBP20.27■□□□□ 0.84
TRIM56-202ENST00000412507 HUS1O60921 280 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 KIF20AO95235 890 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 NR3C1P04150 777 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 LAMP2P13473 410 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 PTPN2P17706 415 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 CASP4P49662 377 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 CDR1P51861 262 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 TWF1Q12792 350 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 DUSP4Q13115 394 aa20.27■□□□□ 0.84
TRIM56-202ENST00000412507 PDCL2Q8N4E4 241 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms