RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TCEAL4Q96EI5 215 aa10□□□□□ -0.81
NIF3L1-203ENST00000409129 ZNF512Q96ME7 567 aaPredicted RBP10□□□□□ -0.81
NIF3L1-203ENST00000409129 TBC1D32Q96NH3 1257 aa10□□□□□ -0.81
NIF3L1-203ENST00000409129 PNMA5Q96PV4 448 aa10□□□□□ -0.81
NIF3L1-203ENST00000409129 ZSCAN32Q9NX65 697 aa10□□□□□ -0.81
NIF3L1-203ENST00000409129 ANKFY1Q9P2R3 1169 aa10□□□□□ -0.81
NIF3L1-203ENST00000409129 AFF4Q9UHB7 1163 aaKnown RBP10□□□□□ -0.81
NIF3L1-203ENST00000409129 GMEB2Q9UKD1 530 aa10□□□□□ -0.81
NIF3L1-203ENST00000409129 INSL5Q9Y5Q6 135 aa10□□□□□ -0.81
NIF3L1-203ENST00000409129 F5P12259 2224 aa10□□□□□ -0.81
NIF3L1-203ENST00000409129 LOC400499M0QZD8 3231 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 TRIP11Q15643 1979 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 COL4A2P08572 1712 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 FLNBO75369 2602 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 CLDN3O15551 220 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 PROS1P07225 676 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 PLA2G4BP0C869 781 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 FCARP24071 287 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 TARSP26639 723 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 CCR2P41597 374 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 MATR3P43243 847 aaKnown RBP eCLIP9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 RPS9P46781 194 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 SLC12A3P55017 1021 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 ATP2C1P98194 919 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 MCL1Q07820 350 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 ADCY1Q08828 1119 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 MMRN1Q13201 1228 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 FZD5Q13467 585 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 FAM78AQ5JUQ0 283 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 IQCEQ6IPM2 695 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 PDZD4Q76G19 769 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 NELL1Q92832 810 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 DNASE1L2Q92874 299 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 PLIN2Q99541 437 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 TRMT61BQ9BVS5 477 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 HAPLN2Q9GZV7 340 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 PLEKHA5Q9HAU0 1116 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 ZFP14Q9HCL3 533 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 HEBP1Q9NRV9 189 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 KCND2Q9NZV8 630 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 CEP72Q9P209 647 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 TUBGCP4Q9UGJ1 667 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 MRPS17Q9Y2R5 130 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 KIF3AQ9Y496 699 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 DMXL2Q8TDJ6 3036 aa9.99□□□□□ -0.81
NIF3L1-203ENST00000409129 ADAMTS20P59510 1910 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 NPHP3-ACAD11A0A0J9YXS1 232 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 TTC26A0AVF1 554 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 VWA3AA6NCI4 1184 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 SHISA7A6NL88 538 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 H0YCG3 227 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 M0QZQ0 153 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 MAN2B1O00754 1011 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 MOSPD3O75425 235 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 OAZ2O95190 189 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 CLTAP09496 248 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 CXCL8P10145 99 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 CPB1P15086 417 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 CYP3A5P20815 502 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 LRPAP1P30533 357 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 NCKAP1LP55160 1127 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 SPAG1Q07617 926 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 TWF1Q12792 350 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 GRM2Q14416 872 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 ZBTB6Q15916 424 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 ARSHQ5FYA8 562 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 RNF19BQ6ZMZ0 732 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 PRR23CQ6ZRP0 262 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 LEMD2Q8NC56 503 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 SMARCD2Q92925 531 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 CDK5RAP3Q96JB5 506 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 ZSWIM3Q96MP5 696 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 ASB16Q96NS5 453 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 OXCT2Q9BYC2 517 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 BRD9Q9H8M2 597 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 LARSQ9P2J5 1176 aaKnown RBP9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 ATG2BQ96BY7 2078 aa9.98□□□□□ -0.81
NIF3L1-203ENST00000409129 SMG1Q96Q15 3661 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 ITPR1Q14643 2758 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 LACTBL1A8MY62 500 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 MYL4P12829 197 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 PSMC3P17980 439 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 GDI1P31150 447 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 TNFSF9P41273 254 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 EPHA5P54756 1037 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 SHC2P98077 582 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 YWHAHQ04917 246 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 KYAT1Q16773 422 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 TMEM119Q4V9L6 283 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 ARL6IP4Q66PJ3 421 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 VITQ6UXI7 678 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 PRR23BQ6ZRT6 265 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 HAUS6Q7Z4H7 955 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 MAP4K3Q8IVH8 894 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 SPNS2Q8IVW8 549 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 TMEM130Q8N3G9 435 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 BEST2Q8NFU1 509 aa9.97□□□□□ -0.81
NIF3L1-203ENST00000409129 KCNN1Q92952 543 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms